RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CCDC160A6NGH7 325 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 SDR42E2A6NKP2 422 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 FOXO6A8MYZ6 492 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TRIM49D1C9J1S8 452 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 SLCO1B7G3V0H7 640 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNF701M0R085 212 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 HNRNPDLO14979 420 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 MAFGO15525 162 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ZSCAN9O15535 394 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNF862O60290 1169 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 RNASEH1O60930 286 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 SNNO75324 88 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 STAMBPO95630 424 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 HLA-DRAP01903 254 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 SERPINE1P05121 402 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 APOA4P06727 396 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PYGLP06737 847 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 THRAP10827 490 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 HARSP12081 509 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PROZP22891 400 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 CDH5P33151 784 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TTKP33981 857 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 RPL22P35268 128 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 FDFT1P37268 417 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 MAGEA6P43360 314 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 GABRB2P47870 512 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ALDH1A3P47895 512 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 LIG4P49917 911 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ADARP55265 1226 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 EIF3EP60228 445 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PSMA6P60900 246 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TUBA4AP68366 448 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 BASP1P80723 227 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 GHRHRQ02643 423 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 FOLH1Q04609 750 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 BST1Q10588 318 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 LAMC2Q13753 1193 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 DPYSQ14117 519 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 DPYSL3Q14195 570 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 NFIXQ14938 502 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 FASTKD3Q14CZ7 662 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 SUZ12Q15022 739 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 CHI3L2Q15782 390 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 GRAMD1BQ3KR37 738 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 USP41Q3LFD5 358 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 CCDC14Q49A88 953 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 XKR9Q5GH70 373 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 RABGAP1LQ5R372 815 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 OGFRL1Q5TC84 451 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 RWDD4Q6NW29 188 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PGM2L1Q6PCE3 622 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 UGT2A3Q6UWM9 527 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 LRRC69Q6ZNQ3 347 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 CAPN12Q6ZSI9 719 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PRUNE1Q86TP1 453 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ERI1Q8IV48 349 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 CTAGE3PQ8IX95 158 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 KBTBD2Q8IY47 623 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PQLC1Q8N2U9 271 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TTC39CQ8N584 583 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TMEM161BQ8NDZ6 487 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ACTL9Q8TC94 416 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TOP1MTQ969P6 601 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 MRRFQ96E11 262 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 VPS50Q96JG6 964 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PRICKLE1Q96MT3 831 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 UIMC1Q96RL1 719 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 RTKNQ9BST9 563 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TMEM121Q9BTD3 319 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 EFHD1Q9BUP0 239 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 UBE2OQ9C0C9 1292 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 MAF1Q9H063 256 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 EBF3Q9H4W6 596 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 PLGRKTQ9HBL7 147 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TMOD2Q9NZR1 351 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 LMCD1Q9NZU5 365 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 SLC9A2Q9UBY0 812 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 ZC3H7BQ9UGR2 993 aaKnown RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 CHORDC1Q9UHD1 332 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 FAF1Q9UNN5 650 aaPredicted RBP7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 SH3GLB1Q9Y371 365 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 TEX264Q9Y6I9 313 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 AK5Q9Y6K8 562 aa7.42□□□□□ -1.22
CLSTN1-204ENST00000464286 A0A088AWK7 358 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 GOLGA8IPA6NC78 632 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 GOLGA8JA6NMD2 632 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 KPNA7A9QM74 516 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 ZNF487B1APH4 448 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 TMEM114B3SHH9 223 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 GOLGA8RI6L899 631 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 WDR46O15213 610 aaKnown RBP7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 CST8O60676 142 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 ESRRBO95718 433 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 SERPINB2P05120 415 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 EIF2S1P05198 315 aaKnown RBP7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 HNRNPCP07910 306 aaKnown RBP eCLIP7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 ZSCAN5DPP0CG00 497 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 KRT10P13645 584 aa7.41□□□□□ -1.22
CLSTN1-204ENST00000464286 RAG1P15918 1043 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms