RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 JUPP14923 745 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 SYT1P21579 422 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 ITPKBP27987 946 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 HNF1BP35680 557 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 CLDN10P78369 228 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 CAMK2GQ13555 558 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-224ENST00000464148 C6orf118Q5T5N4 469 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 TMEM215Q68D42 235 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 SPOPLQ6IQ16 392 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 CNNM4Q6P4Q7 775 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
MRPL55-224ENST00000464148 TMPRSS12Q86WS5 348 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 ZNF276Q8N554 614 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 GOLGA5Q8TBA6 731 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 NXPE2Q96DL1 559 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 DNAI2Q9GZS0 605 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 CLIC5Q9NZA1 410 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 CLEC4EQ9ULY5 219 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 CKAP5Q14008 2032 aa13.93□□□□□ -0.18
MRPL55-224ENST00000464148 SHROOM3Q8TF72 1996 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 TENM4Q6N022 2769 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-224ENST00000464148 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
MRPL55-224ENST00000464148 DNTTP04053 509 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 CD27P26842 260 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 PIK3CAP42336 1068 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 ASPAP45381 313 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 BCAT1P54687 386 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 C21orf59P57076 290 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 DLG4P78352 724 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 SEMG2Q02383 582 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 ZACNQ401N2 412 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 CPXM2Q8N436 756 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 ZNF366Q8N895 744 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-224ENST00000464148 CYB5D2Q8WUJ1 264 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 TWNKQ96RR1 684 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 BLZF1Q9H2G9 400 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 MARCH2Q9P0N8 246 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 AK5Q9Y6K8 562 aa13.92□□□□□ -0.18
MRPL55-224ENST00000464148 GOLGA4Q13439 2230 aaKnown RBP13.91□□□□□ -0.18
MRPL55-224ENST00000464148 SLC12A8A0AV02 714 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 ATXN7O15265 892 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-224ENST00000464148 SPTLC2O15270 562 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 RRP8O43159 456 aaKnown RBP13.91□□□□□ -0.18
MRPL55-224ENST00000464148 DFNA5O60443 496 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 TSPAN3O60637 253 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 CD58P19256 250 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 CASP1P29466 404 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 CTSKP43235 329 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 EHHADHQ08426 723 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 TTC31Q49AM3 519 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-224ENST00000464148 MPPE1Q53F39 396 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 KCNT1Q5JUK3 1230 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 SV2AQ7L0J3 742 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 ARHGAP18Q8N392 663 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 GANCQ8TET4 914 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 DUSP16Q9BY84 665 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 ACE2Q9BYF1 805 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-224ENST00000464148 IMPG2Q9BZV3 1241 aa13.91□□□□□ -0.18
MRPL55-224ENST00000464148 FAM47DPA6NHR8 397 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 ENC1O14682 589 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 C1QL1O75973 258 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 LDOC1O95751 146 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-224ENST00000464148 HLA-DRAP01903 254 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 ABCB4P21439 1286 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 EIF2S3P41091 472 aaKnown RBP13.9□□□□□ -0.18
MRPL55-224ENST00000464148 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-224ENST00000464148 RPS14P62263 151 aaKnown RBP13.9□□□□□ -0.18
MRPL55-224ENST00000464148 ZBTB16Q05516 673 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 INCA1Q0VD86 236 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 CUL4AQ13619 759 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 CHST9Q7L1S5 443 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 GATAD2AQ86YP4 633 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 LINC00301Q8NCQ3 95 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 WFIKKN2Q8TEU8 576 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 SKA1Q96BD8 255 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 ARID3AQ99856 593 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 TMEM245Q9H330 911 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 ZSCAN16Q9H4T2 348 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-224ENST00000464148 PRORYQ9H606 182 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 FBRSQ9HAH7 460 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 MAGEF1Q9HAY2 307 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 SGK2Q9HBY8 427 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 NCKAP1Q9Y2A7 1128 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 PCDHGA1Q9Y5H4 931 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 USP3Q9Y6I4 520 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 CFAP46Q8IYW2 2715 aa13.9□□□□□ -0.18
MRPL55-224ENST00000464148 A0A1B0GTQ1 180 aa13.89□□□□□ -0.19
MRPL55-224ENST00000464148 PVALEFA0A1B0GWK0 134 aa13.89□□□□□ -0.19
MRPL55-224ENST00000464148 IKBKBO14920 756 aa13.89□□□□□ -0.19
MRPL55-224ENST00000464148 POLR2DO15514 142 aaKnown RBP13.89□□□□□ -0.19
MRPL55-224ENST00000464148 RFPL3O75679 317 aa13.89□□□□□ -0.19
MRPL55-224ENST00000464148 ITGAVP06756 1048 aa13.89□□□□□ -0.19
MRPL55-224ENST00000464148 CDK4P11802 303 aa13.89□□□□□ -0.19
MRPL55-224ENST00000464148 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-224ENST00000464148 HLA-FP30511 346 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms