RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ENPP2Q13822 863 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 ZNF234Q14588 700 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 CAMK4Q16566 473 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 FUT11Q495W5 492 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 TMEM215Q68D42 235 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 MSANTD2Q6P1R3 559 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 TRIML1Q8N9V2 468 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 SORCS1Q8WY21 1168 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 CIPCQ9C0C6 399 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 CD93Q9NPY3 652 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 CNTN6Q9UQ52 1028 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 ATXN2Q99700 1313 aaKnown RBP19.66■□□□□ 0.74
SF3A1-205ENST00000463818 TPRP12270 2363 aaKnown RBP19.65■□□□□ 0.74
SF3A1-205ENST00000463818 FBXO21O94952 628 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 LTFP02788 710 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 KRT5P13647 590 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 HOXD9P28356 352 aaPredicted RBP19.65■□□□□ 0.74
SF3A1-205ENST00000463818 GPD2P43304 727 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 EIF4HQ15056 248 aaKnown RBP19.65■□□□□ 0.74
SF3A1-205ENST00000463818 E2F5Q15329 346 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 UAP1L1Q3KQV9 507 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 PEAR1Q5VY43 1037 aaPredicted RBP19.65■□□□□ 0.74
SF3A1-205ENST00000463818 SLC23A3Q6PIS1 610 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 METTL3Q86U44 580 aaKnown RBP19.65■□□□□ 0.74
SF3A1-205ENST00000463818 CREBRFQ8IUR6 639 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 SLC41A1Q8IVJ1 513 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 SCUBE3Q8IX30 993 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 GOLGA1Q92805 767 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 MIS12Q9H081 205 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 PRDM16Q9HAZ2 1276 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 RWDD2AQ9UIY3 292 aa19.65■□□□□ 0.74
SF3A1-205ENST00000463818 GOLGA6L7A0A1B0GV03 622 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 SYNCRIPO60506 623 aaKnown RBP19.64■□□□□ 0.73
SF3A1-205ENST00000463818 NDUFS2O75306 463 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 CFIP05156 583 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 HOXD12P35452 270 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 ZNF445P59923 1031 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 UBE2HP62256 183 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 DUOXA1Q1HG43 343 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 PSAPL1Q6NUJ1 521 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 DENND1BQ6P3S1 775 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 TMPRSS6Q8IU80 811 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 UNC45BQ8IWX7 931 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 CEP76Q8TAP6 659 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 ZNF419Q96HQ0 510 aaPredicted RBP19.64■□□□□ 0.73
SF3A1-205ENST00000463818 CRACR2AQ9BSW2 395 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 MKRN2Q9H000 416 aaKnown RBP19.64■□□□□ 0.73
SF3A1-205ENST00000463818 ITM2CQ9NQX7 267 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 ST7Q9NRC1 585 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 SLC6A14Q9UN76 642 aa19.64■□□□□ 0.73
SF3A1-205ENST00000463818 GIPC1O14908 333 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 IGLV3-27P01718 113 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 FYNP06241 537 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 ENGP17813 658 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 HLA-FP30511 346 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 MAPK8P45983 427 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 RPL34P49207 117 aaKnown RBP19.63■□□□□ 0.73
SF3A1-205ENST00000463818 NOVA1P51513 510 aaKnown RBP19.63■□□□□ 0.73
SF3A1-205ENST00000463818 TBX4P57082 545 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 ARID5AQ03989 594 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 RFWD3Q6PCD5 774 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 SIPA1Q96FS4 1042 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 HSPA12BQ96MM6 686 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 MED15Q96RN5 788 aa19.63■□□□□ 0.73
SF3A1-205ENST00000463818 ACSL4O60488 711 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 LETM1O95202 739 aaPredicted RBP19.62■□□□□ 0.73
SF3A1-205ENST00000463818 EPHX1P07099 455 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 SERPINF2P08697 491 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 NCAM1P13591 858 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 PRKCHP24723 683 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 PMLP29590 882 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 CD6P30203 668 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 ANP32AP39687 249 aaKnown RBP19.62■□□□□ 0.73
SF3A1-205ENST00000463818 ACADSBP45954 432 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 SLC11A2P49281 568 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 SGSHP51688 502 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 GFPT1Q06210 699 aaPredicted RBP19.62■□□□□ 0.73
SF3A1-205ENST00000463818 RING1Q06587 406 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 SH3PXD2AQ5TCZ1 1133 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 PIK3R6Q5UE93 754 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 NUGGCQ68CJ6 796 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 CHST9Q7L1S5 443 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 RGL4Q8IZJ4 473 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 WFIKKN2Q8TEU8 576 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 ZNF606Q8WXB4 792 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 AZIN2Q96A70 460 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 TOE1Q96GM8 510 aaKnown RBP19.62■□□□□ 0.73
SF3A1-205ENST00000463818 FSCN3Q9NQT6 498 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 ABCB8Q9NUT2 735 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 WSB2Q9NYS7 404 aaPredicted RBP19.62■□□□□ 0.73
SF3A1-205ENST00000463818 PLA2G4CQ9UP65 541 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 NAALADL1Q9UQQ1 740 aa19.62■□□□□ 0.73
SF3A1-205ENST00000463818 NUP205Q92621 2012 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 TBL1XO60907 577 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 HLA-EP13747 358 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 SLC9A1P19634 815 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 CSRP1P21291 193 aaKnown RBP19.61■□□□□ 0.73
SF3A1-205ENST00000463818 SLC6A4P31645 630 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 COPAP53621 1224 aa19.61■□□□□ 0.73
SF3A1-205ENST00000463818 FAM133BQ5BKY9 247 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms