RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ITGB1P05556 798 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 LPLP06858 475 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 HSP90AA1P07900 732 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 MYCLP1P12525 358 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 KRT4P19013 534 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CALML3P27482 149 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 LSP1P33241 339 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CTNNB1P35222 781 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 NDUFV1P49821 464 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 GNAQP50148 359 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CLCN5P51795 746 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 HMGN5P82970 282 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 DPTQ07507 201 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 KCNC3Q14003 757 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 TRIM25Q14258 630 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CT83Q5H943 113 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 RABL3Q5HYI8 236 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF662Q6ZS27 426 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ADGRD2Q7Z7M1 963 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CXorf67Q86X51 503 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 LDLRAD3Q86YD5 345 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 LYSMD2Q8IV50 215 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 UBALD2Q8IYN6 164 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 AHI1Q8N157 1196 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 UBR7Q8N806 425 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 MFSD3Q96ES6 412 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 RPGRIP1Q96KN7 1286 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 TAAR1Q96RJ0 339 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 USP28Q96RU2 1077 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 LZTS2Q9BRK4 669 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ZMYND12Q9H0C1 365 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 DLL3Q9NYJ7 618 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 C11orf21Q9P2W6 132 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 PCDHA1Q9Y5I3 950 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 COL4A6Q14031 1691 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 SCN5AQ14524 2016 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 MYH6P13533 1939 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 MYO15AQ9UKN7 3530 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 A0A087X1B8 175 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 SLC37A4O43826 429 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 KDM1AO60341 852 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CDKL5O76039 1030 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 TDP2O95551 362 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CHRNA1P02708 482 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 NR4A1P22736 598 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 U2AF2P26368 475 aaKnown RBP eCLIP4.03□□□□□ -1.762e-8■■■■□ 20.1
SCFD1-204ENST00000463622 LSSP48449 732 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 HSD17B4P51659 736 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 NLRP5P59047 1200 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 STXBP2Q15833 593 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CELF3Q5SZQ8 465 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CPLX2Q6PUV4 134 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 Q6ZPA2 131 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 SEPT14Q6ZU15 432 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 PIK3AP1Q6ZUJ8 805 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 DGLUCYQ7Z3D6 616 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 KIAA0907Q7Z7F0 614 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 UNC5BQ8IZJ1 945 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 BLIDQ8IZY5 108 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF276Q8N554 614 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 VN1R2Q8NFZ6 395 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CYP2W1Q8TAV3 490 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CPT1CQ8TCG5 803 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 NSUN6Q8TEA1 469 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CRYGNQ8WXF5 182 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ATP6V0A1Q93050 837 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 PPP2R3CQ969Q6 453 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 TTPALQ9BTX7 342 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CPEB1Q9BZB8 566 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ENKD1Q9H0I2 346 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 TMEM60Q9H2L4 133 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 RNPEPQ9H4A4 650 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF768Q9H5H4 540 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 RIC8AQ9NPQ8 531 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CHMP5Q9NZZ3 219 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 USP36Q9P275 1121 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 SEC63Q9UGP8 760 aaKnown RBP4.03□□□□□ -1.76
SCFD1-204ENST00000463622 CLIC4Q9Y696 253 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 ZNF292O60281 2723 aa4.03□□□□□ -1.76
SCFD1-204ENST00000463622 DMXL1Q9Y485 3027 aa4.03□□□□□ -1.77
SCFD1-204ENST00000463622 MCM3APO60318 1980 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 ADGRA3Q8IWK6 1321 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 ESYT2A0FGR8 921 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 C17orf102A2RUQ5 167 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 GOLGA6L6A8MZA4 724 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 H3BQV1 296 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 MTSS1O43312 755 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 IPO13O94829 963 aaKnown RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 SEC24DO94855 1032 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 TGFB3P10600 412 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 XPAP23025 273 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 KRT2P35908 639 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 NRIP1P48552 1158 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 MANFP55145 182 aaKnown RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 PHC1P78364 1004 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 AKAP17AQ02040 695 aaKnown RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 SP2Q02086 613 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 GHRHRQ02643 423 aa4.02□□□□□ -1.77
SCFD1-204ENST00000463622 CEBPZQ03701 1054 aaKnown RBP4.02□□□□□ -1.77
SCFD1-204ENST00000463622 PDCD1Q15116 288 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms