RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 STARD3Q14849 445 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 TPD52L1Q16890 204 aaPredicted RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 EXOC3L4Q17RC7 722 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 GEN1Q17RS7 908 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 CT47A1Q5JQC4 288 aaPredicted RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 PPM1JQ5JR12 505 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 DAB2IPQ5VWQ8 1189 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 NUGGCQ68CJ6 796 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 RNF43Q68DV7 783 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 KIAA1211LQ6NV74 962 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 ANKS1BQ7Z6G8 1248 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 KIAA0907Q7Z7F0 614 aaPredicted RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 TMEM110Q86TL2 294 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 IRF2BP1Q8IU81 584 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 SCUBE3Q8IX30 993 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 TMEFF1Q8IYR6 380 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 FRMD1Q8N878 549 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 ZNF557Q8N988 423 aaPredicted RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 CEP76Q8TAP6 659 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 WFIKKN2Q8TEU8 576 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 PIGKQ92643 395 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 P2RY11Q96G91 374 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 MED15Q96RN5 788 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 DDX50Q9BQ39 737 aaKnown RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 CRACR2AQ9BSW2 395 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 TRIM62Q9BVG3 475 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 LSM14BQ9BX40 385 aaKnown RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 MIS12Q9H081 205 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 SMOC1Q9H4F8 434 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 THAP9Q9H5L6 903 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 RXFP3Q9NSD7 469 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 CACNA2D2Q9NY47 1150 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 EVLQ9UI08 416 aaPredicted RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 PLA2G4CQ9UP65 541 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 TNRC6BQ9UPQ9 1833 aaKnown RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 NUMA1Q14980 2115 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ADAMTS9Q9P2N4 1935 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 IGHV1OR15-9A0A0B4J2B8 117 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 PIK3R2O00459 728 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 THAP12O43422 761 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ACSL4O60488 711 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 SYNCRIPO60506 623 aaKnown RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 TSPAN3O60637 253 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 NDUFS2O75306 463 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 CALCAP01258 141 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 FYNP06241 537 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ATP5BP06576 529 aaKnown RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ADRB1P08588 477 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 NCAM1P13591 858 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 NDUFV2P19404 249 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 PON1P27169 355 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 HOXD9P28356 352 aaPredicted RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ERCC5P28715 1186 aaPredicted RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 OXTRP30559 389 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 GNA15P30679 374 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 PTGER3P43115 390 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 MTIF2P46199 727 aaKnown RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 SNX16P57768 344 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 IRX4P78413 519 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 RPL6Q02878 288 aaKnown RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 PTK2Q05397 1052 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ZNF33AQ06730 810 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 LMAN2Q12907 356 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 NNTQ13423 1086 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ZNF234Q14588 700 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 DUOXA1Q1HG43 343 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 FUT11Q495W5 492 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 PIK3R6Q5UE93 754 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 LYSMD4Q5XG99 296 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 DENND1BQ6P3S1 775 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 SLC23A3Q6PIS1 610 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 TRIM65Q6PJ69 517 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 CLEC17AQ6ZS10 378 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 RABEPKQ7Z6M1 372 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 FAM114A1Q8IWE2 563 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ZNF419Q96HQ0 510 aaPredicted RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 MRGPRX1Q96LB2 322 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 SERPINB11Q96P15 392 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 EDEM2Q9BV94 578 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 NUSAP1Q9BXS6 441 aaKnown RBP7.58□□□□□ -1.2
PTPRF-210ENST00000463041 LHX5Q9H2C1 402 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 CLSTN2Q9H4D0 955 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 PRDM16Q9HAZ2 1276 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 TMEM9BQ9NQ34 198 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ITM2CQ9NQX7 267 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 ST7Q9NRC1 585 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 CALCOCO1Q9P1Z2 691 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 APEX2Q9UBZ4 518 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 SUN2Q9UH99 717 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 DACH1Q9UI36 760 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 PILRBQ9UKJ0 227 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 CLEC4EQ9ULY5 219 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 TLR6Q9Y2C9 796 aa7.58□□□□□ -1.2
PTPRF-210ENST00000463041 LNP1A1A4G5 178 aa7.57□□□□□ -1.2
PTPRF-210ENST00000463041 C4orf47A7E2U8 309 aa7.57□□□□□ -1.2
PTPRF-210ENST00000463041 BECN2A8MW95 431 aa7.57□□□□□ -1.2
PTPRF-210ENST00000463041 CDX4O14627 284 aaPredicted RBP7.57□□□□□ -1.2
PTPRF-210ENST00000463041 CAPN9O14815 690 aa7.57□□□□□ -1.2
PTPRF-210ENST00000463041 MSI1O43347 362 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms