RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 LLGL1Q15334 1064 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 ZFYVE27Q5T4F4 411 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 LRRC38Q5VT99 294 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 CES5AQ6NT32 575 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 ANKS1BQ7Z6G8 1248 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 CMTM8Q8IZV2 173 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 SMRP1Q8NCR6 262 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 ST13P5Q8NFI4 369 aaPredicted RBP14□□□□□ -0.17
PBRM1-219ENST00000462207 RAPGEF5Q92565 580 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 ARHGEF38Q9NXL2 777 aa14□□□□□ -0.17
PBRM1-219ENST00000462207 HBS1LQ9Y450 684 aaKnown RBP14□□□□□ -0.17
PBRM1-219ENST00000462207 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 KCNK3O14649 394 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 KCNA5P22460 613 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 ADRA1BP35368 520 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 SLC7A9P82251 487 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 PPP2R5DQ14738 602 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 ERMARDQ5T6L9 678 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 POLNQ7Z5Q5 900 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 FGF13Q92913 245 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 NTAN1Q96AB6 310 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 RNF25Q96BH1 459 aaPredicted RBP13.99□□□□□ -0.17
PBRM1-219ENST00000462207 KCTD15Q96SI1 283 aaPredicted RBP13.99□□□□□ -0.17
PBRM1-219ENST00000462207 POMKQ9H5K3 350 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 DHX35Q9H5Z1 703 aaKnown RBP13.99□□□□□ -0.17
PBRM1-219ENST00000462207 SNX12Q9UMY4 172 aa13.99□□□□□ -0.17
PBRM1-219ENST00000462207 HELZP42694 1942 aaKnown RBP13.99□□□□□ -0.17
PBRM1-219ENST00000462207 LRRD1A4D1F6 860 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 KCNU1A8MYU2 1149 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 KIF2AO00139 706 aaPredicted RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 PAGE1O75459 146 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 APOEP02649 317 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 KLKB1P03952 638 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 KRT7P08729 469 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 DDX6P26196 483 aaKnown RBP eCLIP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 CORO1AP31146 461 aaKnown RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 AVPR1AP37288 418 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 AMPD2Q01433 879 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 BRMS1LQ5PSV4 323 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 ATAT1Q5SQI0 421 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 KATNAL2Q8IYT4 538 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 UBL4BQ8N7F7 174 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 ZSCAN18Q8TBC5 510 aaPredicted RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 COG1Q8WTW3 980 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 TEKT4Q8WW24 435 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 USP13Q92995 863 aaPredicted RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 NCAPGQ9BPX3 1015 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 UBE2ZQ9H832 354 aaPredicted RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 CFAP97Q9P2B7 532 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 CD207Q9UJ71 328 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 USP15Q9Y4E8 981 aaPredicted RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 DENND4AQ7Z401 1863 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 BRWD1Q9NSI6 2320 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 C3orf70A6NLC5 250 aaPredicted RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 FAM72CH0Y354 149 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 ZNF185O15231 689 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 GREM1O60565 184 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 PYGMP11217 842 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 ARSEP51690 589 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 RWDD2BP57060 319 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 COG7P83436 770 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 RING1Q06587 406 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 SCAPQ12770 1279 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 EFHC2Q5JST6 749 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 FAM72AQ5TYM5 149 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 PIK3R6Q5UE93 754 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 PAPD7Q5XG87 772 aaKnown RBP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 FAM72DQ6L9T8 149 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 FAM72BQ86X60 149 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 SH3RF2Q8TEC5 729 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 PLD4Q96BZ4 506 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 RIPOR3Q96MK2 946 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 MYADMQ96S97 322 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 OSBPL9Q96SU4 736 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 HERPUD2Q9BSE4 406 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 SMARCAL1Q9NZC9 954 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 ARHGAP26Q9UNA1 814 aa13.98□□□□□ -0.17
PBRM1-219ENST00000462207 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
PBRM1-219ENST00000462207 GOLGA6L7A0A1B0GV03 622 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 GRXCR2A6NFK2 248 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 LEFTY2O00292 366 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 PFKLP17858 780 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 SP100P23497 879 aaPredicted RBP13.97□□□□□ -0.17
PBRM1-219ENST00000462207 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
PBRM1-219ENST00000462207 CDH6P55285 790 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 BOLA3Q53S33 107 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 PPP6R3Q5H9R7 873 aaPredicted RBP13.97□□□□□ -0.17
PBRM1-219ENST00000462207 FAM78AQ5JUQ0 283 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 NUGGCQ68CJ6 796 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 NADSYN1Q6IA69 706 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 MFSD7Q6UXD7 560 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 DENND1CQ8IV53 801 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 ARID3BQ8IVW6 561 aaPredicted RBP13.97□□□□□ -0.17
PBRM1-219ENST00000462207 RSPRY1Q96DX4 576 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 SIK2Q9H0K1 926 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 PCDH18Q9HCL0 1135 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 HS3ST4Q9Y661 456 aa13.97□□□□□ -0.17
PBRM1-219ENST00000462207 SLC2A3P11169 496 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms