RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GPD2P43304 727 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 DHPSP49366 369 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-207ENST00000461798 RING1Q06587 406 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 GEN1Q17RS7 908 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 MPP7Q5T2T1 576 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 ADGRF1Q5T601 910 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 RNF43Q68DV7 783 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 TCEAL6Q6IPX3 200 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 KIAA1211LQ6NV74 962 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 BEND5Q7L4P6 421 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 RRAGAQ7L523 313 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 ENOSF1Q7L5Y1 443 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 CYP2U1Q7Z449 544 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 KIAA0907Q7Z7F0 614 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-207ENST00000461798 SYT12Q8IV01 421 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 ARHGEF19Q8IW93 802 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 STK32AQ8WU08 396 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 UCMAQ8WVF2 138 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 EDEM1Q92611 657 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 TCEAL3Q969E4 200 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 TMA16Q96EY4 203 aaKnown RBP9.56□□□□□ -0.88
BRCA1-207ENST00000461798 FAM81BQ96LP2 452 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 MED15Q96RN5 788 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 INTS2Q9H0H0 1204 aaKnown RBP9.56□□□□□ -0.88
BRCA1-207ENST00000461798 ELOVL2Q9NXB9 296 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 CALCOCO1Q9P1Z2 691 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 PILRBQ9UKJ0 227 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 CLEC4EQ9ULY5 219 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 STON1Q9Y6Q2 735 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 MYH10P35580 1976 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 RALGAPA1Q6GYQ0 2036 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 IGHV1OR15-9A0A0B4J2B8 117 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 LNP1A1A4G5 178 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 C4orf47A7E2U8 309 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 WASH3PC4AMC7 463 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 CDX4O14627 284 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 SART1O43290 800 aaKnown RBP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 AP5Z1O43299 807 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 FYNP06241 537 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 LCP1P13796 627 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 NDUFV2P19404 249 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 BRD2P25440 801 aaKnown RBP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 HOXD9P28356 352 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 RGS7P49802 495 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 IRX4P78413 519 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 SLC23A3Q6PIS1 610 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 ANKS1BQ7Z6G8 1248 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 TMEM110Q86TL2 294 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 IRF2BP1Q8IU81 584 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 UNC45BQ8IWX7 931 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 TMEFF1Q8IYR6 380 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 DDI1Q8WTU0 396 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 PIGKQ92643 395 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 BHMTQ93088 406 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 ZNF419Q96HQ0 510 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 MRGPRX1Q96LB2 322 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 EDEM2Q9BV94 578 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 SLC4A5Q9BY07 1137 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 UBE2TQ9NPD8 197 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 ITM2CQ9NQX7 267 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 TMEM74BQ9NUR3 256 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 CACNA2D2Q9NY47 1150 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 CHMP5Q9NZZ3 219 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 SFMBT1Q9UHJ3 866 aa9.55□□□□□ -0.88
BRCA1-207ENST00000461798 TPRP12270 2363 aaKnown RBP9.55□□□□□ -0.88
BRCA1-207ENST00000461798 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
BRCA1-207ENST00000461798 PATE3B3GLJ2 98 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 M0QYV0 167 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 IRAK2O43187 625 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 KCNK5O95279 499 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 LTFP02788 710 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 IL12RB1P42701 662 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 ACADSBP45954 432 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 LMAN2Q12907 356 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 NNTQ13423 1086 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 STARD3Q14849 445 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 DAB2IPQ5VWQ8 1189 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 LYSMD4Q5XG99 296 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 NUGGCQ68CJ6 796 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 TMEM215Q68D42 235 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 ZNF557Q8N988 423 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-207ENST00000461798 MLKLQ8NB16 471 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 CEP76Q8TAP6 659 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 WFIKKN2Q8TEU8 576 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 ZNF606Q8WXB4 792 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 SLC39A13Q96H72 371 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 TMEM9BQ9NQ34 198 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 SLC6A14Q9UN76 642 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 RAD54BQ9Y620 910 aa9.54□□□□□ -0.88
BRCA1-207ENST00000461798 MSI1O43347 362 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 MED7O43513 233 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 ACSL4O60488 711 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 CALCAP01258 141 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 IGLV3-19P01714 112 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 NCAM1P13591 858 aa9.53□□□□□ -0.88
BRCA1-207ENST00000461798 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 CSRP1P21291 193 aaKnown RBP9.53□□□□□ -0.88
BRCA1-207ENST00000461798 ITPKAP23677 461 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms