RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PEPDP12955 493 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 KRT20P35900 424 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 PBX1P40424 430 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 STAT1P42224 750 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 GSTM5P46439 218 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 NPTX2P47972 431 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 CDK7P50613 346 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 PDE6CP51160 858 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 FAM3BP58499 235 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 SP2Q02086 613 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TAP2Q03519 686 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TUBB3Q13509 450 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 DYRK1AQ13627 763 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ACOX1Q15067 660 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ANKRD40Q6AI12 368 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 SFRP4Q6FHJ7 346 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 LRRC8DQ7L1W4 858 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ENOSF1Q7L5Y1 443 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 KRT27Q7Z3Y8 459 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 MRGPREQ86SM8 312 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 MAPKAPK5Q8IW41 473 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ADGRG5Q8IZF4 528 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ATG4AQ8WYN0 398 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TMEM125Q96AQ2 219 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 REXO5Q96IC2 774 aaKnown RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 EIF3CQ99613 913 aaKnown RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 ARHGAP39Q9C0H5 1083 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 LMAN2LQ9H0V9 348 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 CYP4F11Q9HBI6 524 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TBC1D29Q9UFV1 150 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ZBTB1Q9Y2K1 713 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 NEU2Q9Y3R4 380 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 LOC105369274A0A096LPK9 316 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 LOC102723532A0A0G2JNH3 316 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 H3BNC9 293 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 RNASET2O00584 256 aaKnown RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 KIAA0355O15063 1070 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 FOXN1O15353 648 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 CTIFO43310 598 aaKnown RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 TRIAP1O43715 76 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 WDR47O94967 919 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ERBB2P04626 1255 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 HLA-DOAP06340 250 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ELANEP08246 267 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 PDHA1P08559 390 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 MYCLP12524 364 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 TGM1P22735 817 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 THBS4P35443 961 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 HOXD12P35452 270 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 PAFAH1B1P43034 410 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 RNASE9P60153 205 aaKnown RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 ARF3P61204 181 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 ARF1P84077 181 aaKnown RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 BFSP2Q13515 415 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 DCTN1Q14203 1278 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 MYBPC2Q14324 1141 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 HLXQ14774 488 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 TBCEQ15813 527 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 NFIL3Q16649 462 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 SPECC1Q5M775 1068 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 FAM69AQ5T7M9 428 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 SLC9A4Q6AI14 798 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 MICALCLQ6ZW33 695 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TMTC3Q6ZXV5 915 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 DNAJC10Q8IXB1 793 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 IZUMO1Q8IYV9 350 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 OR4N4Q8N0Y3 316 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 FAM109AQ8N4B1 249 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 NGEFQ8N5V2 710 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 ANKRD44Q8N8A2 993 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 LSMEM1Q8N8F7 131 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 FSIP1Q8NA03 581 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 SUPT20HQ8NEM7 779 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 SLC2A12Q8TD20 617 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 PAAF1Q9BRP4 392 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 HERC2P3Q9BVR0 1158 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 PHF7Q9BWX1 381 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 USP44Q9H0E7 712 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 RSPH9Q9H1X1 276 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 CCDC68Q9H2F9 335 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TTYH1Q9H313 450 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 GHITMQ9H3K2 345 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TMLHEQ9NVH6 421 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 RNF181Q9P0P0 153 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 STEAP1Q9UHE8 339 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 VPS28Q9UK41 221 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 RAB21Q9UL25 225 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 TRPC5Q9UL62 973 aaPredicted RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 CAMK2AQ9UQM7 478 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 NAALADL1Q9UQQ1 740 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 DRG1Q9Y295 367 aaKnown RBP3.27□□□□□ -1.89
HPS3-203ENST00000460822 GDAQ9Y2T3 454 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 DMRT1Q9Y5R6 373 aa3.27□□□□□ -1.89
HPS3-203ENST00000460822 LMTK3Q96Q04 1460 aa3.26□□□□□ -1.89
HPS3-203ENST00000460822 TDRD9Q8NDG6 1382 aaKnown RBP3.26□□□□□ -1.89
HPS3-203ENST00000460822 SPATA31A3Q5VYP0 1347 aa3.26□□□□□ -1.89
HPS3-203ENST00000460822 A0A1W2PS29 197 aa3.26□□□□□ -1.89
HPS3-203ENST00000460822 GXYLT2A0PJZ3 443 aa3.26□□□□□ -1.89
HPS3-203ENST00000460822 SYNDIG1LA6NDD5 238 aa3.26□□□□□ -1.89
HPS3-203ENST00000460822 AGAP5A6NIR3 686 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms