RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 USP17L24Q0WX57 530 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 DLG1Q12959 904 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SMAD4Q13485 552 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 GPNMBQ14956 572 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 RBMS2Q15434 407 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 LY6EQ16553 131 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ACKR1Q16570 336 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 LRRC26Q2I0M4 334 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ZNF284Q2VY69 593 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 AMOTQ4VCS5 1084 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 C6orf99Q4VX62 202 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 LACTB2Q53H82 288 aaPredicted RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TFDP3Q5H9I0 405 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TCTEX1D4Q5JR98 221 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SAMD4BQ5PRF9 694 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TBCELQ5QJ74 424 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 WWC2Q6AWC2 1192 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 PYHIN1Q6K0P9 492 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ZNF544Q6NX49 715 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 USP17L6PQ6QN14 398 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 MFSD7Q6UXD7 560 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 FOXI2Q6ZQN5 318 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 Q6ZRX8 168 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 PRSS48Q7RTY5 328 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 PRSS41Q7RTY9 318 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TIPARPQ7Z3E1 657 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 BCDIN3DQ7Z5W3 292 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 FAM124AQ86V42 546 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 PROSER2Q86WR7 435 aaPredicted RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 DGKHQ86XP1 1220 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ANGPTL5Q86XS5 388 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 CALHM1Q8IU99 346 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ZZZ3Q8IYH5 903 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SMYD4Q8IYR2 804 aaPredicted RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ZNF710Q8N1W2 664 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 Q8N1Y9 231 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ZNF664Q8N3J9 261 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ZNF114Q8NC26 417 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 NECAP1Q8NC96 275 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ZNF248Q8NDW4 579 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 WFDC11Q8NEX6 87 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 OR52N2Q8NGI0 321 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 CYP2W1Q8TAV3 490 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SPATA20Q8TB22 786 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TMEM163Q8TC26 289 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 WFDC5Q8TCV5 224 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 DDX54Q8TDD1 881 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 RSPH1Q8WYR4 309 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 RFFLQ8WZ73 363 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 POMGNT1Q8WZA1 660 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SMPDL3AQ92484 453 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 RCC1LQ96I51 464 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 CLPTM1LQ96KA5 538 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 IP6K3Q96PC2 410 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 FAM193BQ96PV7 902 aaPredicted RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 GMLQ99445 158 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 MMP19Q99542 508 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TACO1Q9BSH4 297 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ST6GALNAC5Q9BVH7 336 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 PRRG4Q9BZD6 226 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TMEM39BQ9GZU3 492 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 KLC2Q9H0B6 622 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 FAM234AQ9H0X4 552 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 KCNF1Q9H3M0 494 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 FBXL15Q9H469 300 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 DHX35Q9H5Z1 703 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 MINDY3Q9H8M7 445 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 VRTNQ9H8Y1 702 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 XPNPEP3Q9NQH7 507 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SPHK2Q9NRA0 654 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ABCB8Q9NUT2 735 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 VPS54Q9P1Q0 977 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 MAP10Q9P2G4 905 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 GMPR2Q9P2T1 348 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ABCD2Q9UBJ2 740 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SFMBT1Q9UHJ3 866 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 TMEM59LQ9UK28 342 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ADAM28Q9UKQ2 775 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 AGO2Q9UKV8 859 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 MTUS1Q9ULD2 1270 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 LRFN2Q9ULH4 789 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 UBQLN1Q9UMX0 589 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ST3GAL5Q9UNP4 418 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 NEU3Q9UQ49 428 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 LRCH1Q9Y2L9 728 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 ANGPTL3Q9Y5C1 460 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 CLCA3PQ9Y6N3 262 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 SEC23IPQ9Y6Y8 1000 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 GRIN2BQ13224 1484 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 CROCC2H7BZ55 1655 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 QRICH2Q9H0J4 1663 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 AFDNP55196 1824 aaKnown RBP-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 DOCK3Q8IZD9 2030 aa-1.84□□□□□ -2.7
SNORD54-201ENST00000459159 PNPLA6Q8IY17 1366 aa-1.85□□□□□ -2.7
SNORD54-201ENST00000459159 ZMYM2Q9UBW7 1377 aa-1.85□□□□□ -2.7
SNORD54-201ENST00000459159 IGLV2-18A0A075B6J9 118 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 LOC390937A0A1W2PQ73 354 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 SLC22A23A1A5C7 686 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 C1orf226A1L170 272 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 FAM181BA6NEQ2 426 aa-1.85□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms