RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TGM2P21980 687 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ZNF143P52747 638 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 INHBCP55103 352 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 CDH6P55285 790 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MED21Q13503 144 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 TRPC3Q13507 836 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 CAPSQ13938 189 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 CCNIQ14094 377 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MYBPC3Q14896 1274 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ZNF699Q32M78 642 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 SFT2D3Q587I9 215 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 TEDDM1Q5T9Z0 273 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MAP3K21Q5TCX8 1036 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MBLAC2Q68D91 279 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 RASSF3Q86WH2 238 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 WDR75Q8IWA0 830 aaKnown RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 NDUFAF2Q8N183 169 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 CCDC33Q8N5R6 958 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 REPS2Q8NFH8 660 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ACMSDQ8TDX5 336 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ACTRT2Q8TDY3 377 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 SLC7A3Q8WY07 619 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 USP6NLQ92738 828 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ZBED3Q96IU2 234 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 SIGLEC10Q96LC7 697 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 RILPQ96NA2 401 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 SLC13A1Q9BZW2 595 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 KLHL4Q9C0H6 718 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MIS12Q9H081 205 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 KLC2Q9H0B6 622 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 FAM96AQ9H5X1 160 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 UGT1A7Q9HAW7 530 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 UGT1A10Q9HAW8 530 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 UGT1A8Q9HAW9 530 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 ZNF302Q9NR11 478 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ETNK2Q9NVF9 386 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 NDUFA13Q9P0J0 144 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MARCOQ9UEW3 520 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 PHF24Q9UPV7 400 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 CTDP1Q9Y5B0 961 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 WDR90Q96KV7 1748 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 PLXNA1Q9UIW2 1896 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 A0A1B0GVG6 124 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 SMIM31A0A1B0GVY4 71 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 GOLGA8CPA6NN73 597 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MEI4A8MW99 385 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 H7C0C1 242 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 KCNN4O15554 427 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 FGF3P11487 239 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 TPSB2P20231 275 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 IL4RP24394 825 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ATP5OP48047 213 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 CLCN2P51788 898 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 EFNA5P52803 228 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 OAZ1P54368 228 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 IRX4P78413 519 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 SLC25A3Q00325 362 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 DGKZQ13574 1117 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 BMPR2Q13873 1038 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 PDK2Q15119 407 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 TARBP2Q15633 366 aaKnown RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 TPSAB1Q15661 275 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 PABPC1LQ4VXU2 614 aaKnown RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 SLC9A4Q6AI14 798 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ZNF534Q76KX8 674 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 SLC25A41Q8N5S1 370 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 PLD5Q8N7P1 536 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 SHKBP1Q8TBC3 707 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 WNT2BQ93097 391 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 BTBD9Q96Q07 612 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 NDNQ99608 321 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 EBNA1BP2Q99848 306 aaKnown RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 CNPY3Q9BT09 278 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MRPL4Q9BYD3 311 aaKnown RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 RPAP3Q9H6T3 665 aaPredicted RBP8.77□□□□□ -1.01
VPS50-208ENST00000458707 PICK1Q9NRD5 415 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.77□□□□□ -1.01
VPS50-208ENST00000458707 DNAJC28Q9NX36 388 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 MOCS1Q9NZB8 636 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 ADAMTS6Q9UKP5 1117 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 PCDHA11Q9Y5I1 949 aa8.77□□□□□ -1.01
VPS50-208ENST00000458707 FNDC1Q4ZHG4 1894 aaPredicted RBP8.76□□□□□ -1.01
VPS50-208ENST00000458707 SF3B1O75533 1304 aaKnown RBP eCLIP8.76□□□□□ -1.01
VPS50-208ENST00000458707 ZNF487B1APH4 448 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 ZNF195O14628 629 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 ATP9BO43861 1147 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 B4GALT4O60513 344 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 SIN3BO75182 1162 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 IDO1P14902 403 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 CD19P15391 556 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 VCLP18206 1134 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 GPD1P21695 349 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 PRDX6P30041 224 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 ICAM3P32942 547 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 GRIA2P42262 883 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 COPAP53621 1224 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 SP2Q02086 613 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 SP4Q02446 784 aa8.76□□□□□ -1.01
VPS50-208ENST00000458707 FASTKD1Q53R41 847 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms