RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 PGLYRP2Q96PD5 576 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 DDX43Q9NXZ2 648 aaKnown RBP16.81■□□□□ 0.28
LSS-205ENST00000457828 ITGA11Q9UKX5 1188 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 KLHL2O95198 593 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 ACLYP53396 1101 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 CCDC15Q0P6D6 951 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 PID1Q7Z2X4 250 aa16.81■□□□□ 0.28
LSS-205ENST00000457828 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.81■□□□□ 0.28
LSS-205ENST00000457828 SMAPO00193 183 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 GSC2O15499 205 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 AVILO75366 819 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 MTA2O94776 668 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 NCAM1P13591 858 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 ALADP13716 330 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 SNX17Q15036 470 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 ZACNQ401N2 412 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 RARS2Q5T160 578 aaKnown RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 NPNTQ6UXI9 565 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 PDCD6IPQ8WUM4 868 aaKnown RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 TRMT13Q9NUP7 481 aaKnown RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 UBR2Q8IWV8 1755 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 IRF1P10914 325 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 GPD1P21695 349 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 KCNA4P22459 653 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 BST1Q10588 318 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 TCHHL1Q5QJ38 904 aaPredicted RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 C10orf120Q5SQS8 335 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 OLFML2BQ68BL8 750 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.288e-7■□□□□ 10.1
LSS-205ENST00000457828 ACO2Q99798 780 aaKnown RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 NMUR2Q9GZQ4 415 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 TSPYL2Q9H2G4 693 aaPredicted RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 ACSS3Q9H6R3 686 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 hCG_1818297A0A087WSY0 165 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 EME2A4GXA9 379 aaPredicted RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 WFS1O76024 890 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 SP2Q02086 613 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 LAMB3Q13751 1172 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 C12orf56Q8IXR9 622 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 SLC7A14Q8TBB6 771 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 TXLNGYQ9BZA5 131 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 LSM7Q9UK45 103 aaKnown RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 MYH3P11055 1940 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 KPNA7A9QM74 516 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 DNAJC6O75061 913 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 ADSSP30520 456 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 ACADSBP45954 432 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 LHX1P48742 406 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 ANKRD20A4Q4UJ75 823 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 C16orf46Q6P387 395 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 CMTM5Q96DZ9 223 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 ZCWPW1Q9H0M4 648 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 FAM96AQ9H5X1 160 aa16.8■□□□□ 0.28
LSS-205ENST00000457828 MAFBQ9Y5Q3 323 aaPredicted RBP16.8■□□□□ 0.28
LSS-205ENST00000457828 PEX11AO75192 247 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 TNFSF9P41273 254 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 CTU1Q7Z7A3 348 aaKnown RBP16.79■□□□□ 0.28
LSS-205ENST00000457828 TTC7BQ86TV6 843 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 MIB1Q86YT6 1006 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 BSNDQ8WZ55 320 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 CLPTM1LQ96KA5 538 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 SYT15Q9BQS2 421 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 FTHL17Q9BXU8 183 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 SUDS3Q9H7L9 328 aaPredicted RBP16.79■□□□□ 0.28
LSS-205ENST00000457828 VDRP11473 427 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 ATICP31939 592 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 NNMTP40261 264 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 DPYSL3Q14195 570 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 ANKRD22Q5VYY1 191 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 ACAD11Q709F0 780 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 UNC45BQ8IWX7 931 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 BHMTQ93088 406 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 TMA16Q96EY4 203 aaKnown RBP16.79■□□□□ 0.28
LSS-205ENST00000457828 XAB2Q9HCS7 855 aaKnown RBP16.79■□□□□ 0.28
LSS-205ENST00000457828 DSEQ9UL01 958 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 PADI3Q9ULW8 664 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 TAF1P21675 1872 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 PRPF4O43172 522 aaKnown RBP eCLIP16.79■□□□□ 0.281e-7■■□□□ 11.9
LSS-205ENST00000457828 CCND3P30281 292 aaPredicted RBP16.79■□□□□ 0.28
LSS-205ENST00000457828 MIPP30301 263 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 SERPINB9P50453 376 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
LSS-205ENST00000457828 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 ZNF467Q7Z7K2 595 aaPredicted RBP16.79■□□□□ 0.28
LSS-205ENST00000457828 GTSE1Q9NYZ3 720 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 THEGQ9P2T0 379 aa16.79■□□□□ 0.28
LSS-205ENST00000457828 UMODL1Q5DID0 1318 aa16.78■□□□□ 0.28
LSS-205ENST00000457828 MOXD2PA6NHM9 499 aa16.78■□□□□ 0.28
LSS-205ENST00000457828 E9PBE3 544 aa16.78■□□□□ 0.28
LSS-205ENST00000457828 KLHL41O60662 606 aa16.78■□□□□ 0.28
LSS-205ENST00000457828 SMNDC1O75940 238 aaKnown RBP eCLIP16.78■□□□□ 0.286e-7■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms