RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 THOC1Q96FV9 657 aaKnown RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 C12orf65Q9H3J6 166 aaKnown RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 EIF2B3Q9NR50 452 aaKnown RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 MIOSQ9NXC5 875 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 GIT1Q9Y2X7 761 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 M0QYT0 321 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 SNRPAP09012 282 aaKnown RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 CLCNKBP51801 687 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 DAOAP59103 153 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 ELF3P78545 371 aaPredicted RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 SARNPP82979 210 aaKnown RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 DEUP1Q05D60 604 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 PAFAH1B3Q15102 231 aaKnown RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 RAB41Q5JT25 222 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 LGSNQ5TDP6 509 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 SYPL2Q5VXT5 272 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 DENND5BQ6ZUT9 1274 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 FAM35AQ86V20 835 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 PARP9Q8IXQ6 854 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 PPM1NQ8N819 430 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 NETO2Q8NC67 525 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 ZNF398Q8TD17 642 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 ULBP1Q9BZM6 244 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 ZFYVE28Q9HCC9 887 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 CNGB3Q9NQW8 809 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 PCDHA11Q9Y5I1 949 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 TIMM13Q9Y5L4 95 aaPredicted RBP17.22■□□□□ 0.35
CCDC43-202ENST00000457422 PTCH2Q9Y6C5 1203 aa17.22■□□□□ 0.35
CCDC43-202ENST00000457422 COL4A4P53420 1690 aaPredicted RBP17.21■□□□□ 0.35
CCDC43-202ENST00000457422 FAM159BA6NKW6 160 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 CXorf49A8MYA2 514 aaPredicted RBP17.21■□□□□ 0.35
CCDC43-202ENST00000457422 NRP1O14786 923 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 OPHN1O60890 802 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 ZNF189O75820 626 aaPredicted RBP17.21■□□□□ 0.35
CCDC43-202ENST00000457422 PGK1P00558 417 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 CHRNA1P02708 482 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 RPLP2P05387 115 aaKnown RBP17.21■□□□□ 0.35
CCDC43-202ENST00000457422 FYNP06241 537 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 CYBAP13498 195 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 CCNB1P14635 433 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 INHBEP58166 350 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 SCAPQ12770 1279 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 NME3Q13232 169 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 DPYSQ14117 519 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 PDK1Q15118 436 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 CTAGE3PQ8IX95 158 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 C3orf58Q8NDZ4 430 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 LGMNQ99538 433 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 SMOQ99835 787 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 UPF3AQ9H1J1 476 aaKnown RBP17.21■□□□□ 0.35
CCDC43-202ENST00000457422 SMYD2Q9NRG4 433 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 PIGVQ9NUD9 493 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 MKS1Q9NXB0 559 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 CDH9Q9ULB4 789 aa17.21■□□□□ 0.35
CCDC43-202ENST00000457422 TRIM49D1C9J1S8 452 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 F5H423 210 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 AP1G2O75843 785 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 STK10O94804 968 aaKnown RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 PYGBP11216 843 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 RPL9P32969 192 aaKnown RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 CCNFP41002 786 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MGAT3Q09327 533 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 CRHR2Q13324 411 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 STEAP4Q687X5 459 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 GPRIN1Q7Z2K8 1008 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MRPL10Q7Z7H8 261 aaKnown RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 SERINC5Q86VE9 423 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MPP5Q8N3R9 675 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 RNF169Q8NCN4 708 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 ZMIZ2Q8NF64 920 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MTBPQ96DY7 904 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 PGAP3Q96FM1 320 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 PCED1BQ96HM7 432 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 FERMT1Q9BQL6 677 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 TRIM56Q9BRZ2 755 aaKnown RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MANSC1Q9H8J5 431 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 WDR91A4D1P6 747 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 ARL5CA6NH57 179 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 HGSO14964 777 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 DCLK1O15075 740 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 DCTN3O75935 186 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 NQO1P15559 274 aaKnown RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 ALDH3A1P30838 453 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 GRIA1P42261 906 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 SCNN1GP51170 649 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 NKX3-2P78367 333 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 SEMA3BQ13214 749 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 SETDB1Q15047 1291 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 SPDYAQ5MJ70 313 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 FYB2Q5VWT5 728 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 RFX8Q6ZV50 586 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 ASRGL1Q7L266 308 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 P2RY11Q96G91 374 aa17.2■□□□□ 0.34
CCDC43-202ENST00000457422 WDR6Q9NNW5 1121 aaKnown RBP17.2■□□□□ 0.34
CCDC43-202ENST00000457422 NMRK2Q9NPI5 230 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms