RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, human

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM2-215	ENST00000456545	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PHTF2	Q8N3S3	785 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	EPS8L1	Q8TE68	723 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CPA5	Q8WXQ8	436 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	AZIN2	Q96A70	460 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CBX8	Q9HC52	389 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	POLM	Q9NP87	494 aa	Predicted RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	RTN4	Q9NQC3	1192 aa	Known RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SEPT11	Q9NVA2	429 aa	Known RBP	18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	COX16	Q9P0S2	106 aa		18.8	■□□□□ 0.6
PDLIM2-215	ENST00000456545	AXIN1	O15169	862 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TEX33	O43247	280 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PENK	P01210	267 aa	Predicted RBP	18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	IGLV3-27	P01718	113 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CDH5	P33151	784 aa	Predicted RBP	18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	KIR2DL1	P43626	348 aa	Predicted RBP	18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	DGKE	P52429	567 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CDR2	Q01850	454 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SIM2	Q14190	667 aa	Predicted RBP	18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	IQCB1	Q15051	598 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZSCAN23	Q3MJ62	389 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NAA35	Q5VZE5	725 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FAM217A	Q8IXS0	508 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ATP6V0D2	Q8N8Y2	350 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	IL17RC	Q8NAC3	791 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC20A1	Q8WUM9	679 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	UCMA	Q8WVF2	138 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	DDX1	Q92499	740 aa	Known RBP	18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC2A11	Q9BYW1	496 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZDHHC4	Q9NPG8	344 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	DDIT4	Q9NX09	232 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NCDN	Q9UBB6	729 aa		18.79	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CACNA1H	O95180	2353 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CCDC163	A0A0D9SF12	145 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	GOLGA6L7	A0A1B0GV03	622 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ANTXRL	A6NF34	631 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	IRAK2	O43187	625 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CISD3	P0C7P0	127 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC2A3	P11169	496 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ABCB4	P21439	1286 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NOS2	P35228	1153 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	E2F5	Q15329	346 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CRY1	Q16526	586 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FAM102A	Q5T9C2	384 aa	Predicted RBP	18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	RFWD3	Q6PCD5	774 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	OLFML1	Q6UWY5	402 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TRIM72	Q6ZMU5	477 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	LUZP1	Q86V48	1076 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	CHPF	Q8IZ52	775 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PGBD3	Q8N328	593 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PIWIL1	Q96J94	861 aa	Known RBP	18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FCRL2	Q96LA5	508 aa	Predicted RBP	18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	STIM2	Q9P246	746 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	STOML2	Q9UJZ1	356 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FBXO10	Q9UK96	956 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	STARD13	Q9Y3M8	1113 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	FANCM	Q8IYD8	2048 aa		18.78	■□□□□ 0.6
PDLIM2-215	ENST00000456545	PRRT4	C9JH25	899 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	GOLGA8S	H3BPF8	625 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SGK1	O00141	431 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HR	O43593	1189 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	TBL1X	O60907	577 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NTSR1	P30989	418 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	HOXC13	P31276	330 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	WAS	P42768	502 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	GABRB2	P47870	512 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NME3	Q13232	169 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	LPAL2	Q16609	132 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ANO7	Q6IWH7	933 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC26A9	Q7LBE3	791 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	ANKS1B	Q7Z6G8	1248 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC39A13	Q96H72	371 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC2A13	Q96QE2	648 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	IRX2	Q9BZI1	471 aa	Predicted RBP	18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	EPC1	Q9H2F5	836 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	RRN3	Q9NYV6	651 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	NOCT	Q9UK39	431 aa	Known RBP	18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	STAP1	Q9ULZ2	295 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SMG5	Q9UPR3	1016 aa	Known RBP	18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	SLC27A6	Q9Y2P4	619 aa		18.77	■□□□□ 0.6
PDLIM2-215	ENST00000456545	KIAA1549L	Q6ZVL6	1849 aa		18.77	■□□□□ 0.59
PDLIM2-215	ENST00000456545		M0QYT0	321 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	DAB1	O75553	588 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	RPP40	O75818	363 aa	Known RBP	18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	FER	P16591	822 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	CCR1	P32246	355 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	NOMO3	P69849	1222 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	SRSF5	Q13243	272 aa	Known RBP	18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	PIK3R6	Q5UE93	754 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	EGFLAM	Q63HQ2	1017 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	ZNF557	Q8N988	423 aa	Predicted RBP	18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	SUMF1	Q8NBK3	374 aa		18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	HJURP	Q8NCD3	748 aa	Predicted RBP	18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	ZNF397	Q8NF99	534 aa	Predicted RBP	18.76	■□□□□ 0.59
PDLIM2-215	ENST00000456545	RUBCN	Q92622	972 aa		18.76	■□□□□ 0.59

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