RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 KLHDC10Q6PID8 442 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 EPM2AIP1Q7L775 607 aaPredicted RBP10.38□□□□□ -0.75
CLCN4-204ENST00000454850 SCD5Q86SK9 330 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 TADA2BQ86TJ2 420 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 DENND1CQ8IV53 801 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 ZNF507Q8TCN5 953 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 CNDP2Q96KP4 475 aaKnown RBP10.38□□□□□ -0.75
CLCN4-204ENST00000454850 BTBD1Q9H0C5 482 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 AGO1Q9UL18 857 aaKnown RBP10.38□□□□□ -0.75
CLCN4-204ENST00000454850 ZNF510Q9Y2H8 683 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 PCDHA5Q9Y5H7 936 aa10.38□□□□□ -0.75
CLCN4-204ENST00000454850 CYSRT1A8MQ03 144 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 CAPN9O14815 690 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 TSPAN3O60637 253 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 LDOC1O95751 146 aaPredicted RBP10.37□□□□□ -0.75
CLCN4-204ENST00000454850 DNTTP04053 509 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 RALAP11233 206 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 TRIM21P19474 475 aaKnown RBP10.37□□□□□ -0.75
CLCN4-204ENST00000454850 COG7P83436 770 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 CCDC173Q0VFZ6 552 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 CAMK2GQ13555 558 aaPredicted RBP10.37□□□□□ -0.75
CLCN4-204ENST00000454850 E2F5Q15329 346 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 BMT2Q1RMZ1 405 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 HES3Q5TGS1 186 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 RSRC2Q7L4I2 434 aaKnown RBP10.37□□□□□ -0.75
CLCN4-204ENST00000454850 GPR155Q7Z3F1 870 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 CRYBG2Q8N1P7 616 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 EID2Q8N6I1 236 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 RBBP8NLQ8NC74 664 aaPredicted RBP10.37□□□□□ -0.75
CLCN4-204ENST00000454850 GANCQ8TET4 914 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 BAP1Q92560 729 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 DHX58Q96C10 678 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 SLC6A18Q96N87 628 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 TWNKQ96RR1 684 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 ACE2Q9BYF1 805 aaPredicted RBP10.37□□□□□ -0.75
CLCN4-204ENST00000454850 DCLK3Q9C098 648 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 TNMDQ9H2S6 317 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 OSGEPQ9NPF4 335 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 PPP4R2Q9NY27 417 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 COL12A1Q99715 3063 aa10.37□□□□□ -0.75
CLCN4-204ENST00000454850 UBE4BO95155 1302 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.36□□□□□ -0.75
CLCN4-204ENST00000454850 A0A1B0GTQ1 180 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 SLC12A8A0AV02 714 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 J3QKU1 62 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 C4BPAP04003 597 aaKnown RBP10.36□□□□□ -0.75
CLCN4-204ENST00000454850 ITGAVP06756 1048 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 CD58P19256 250 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 CASP1P29466 404 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 PIK3CAP42336 1068 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 ASPAP45381 313 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 PSEN1P49768 467 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 KIF11P52732 1056 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 RPS14P62263 151 aaKnown RBP10.36□□□□□ -0.75
CLCN4-204ENST00000454850 CXADRP78310 365 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 DLG4P78352 724 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 CFHR1Q03591 330 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 TTC31Q49AM3 519 aaPredicted RBP10.36□□□□□ -0.75
CLCN4-204ENST00000454850 CHST9Q7L1S5 443 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 CCDC186Q7Z3E2 898 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 UNC93AQ86WB7 457 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 PARD3BQ8TEW8 1205 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 CYFIP2Q96F07 1278 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 HNRNPABQ99729 332 aaKnown RBP10.36□□□□□ -0.75
CLCN4-204ENST00000454850 ARID3AQ99856 593 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 LRRC27Q9C0I9 530 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 SLC39A2Q9NP94 309 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 AASDHPPTQ9NRN7 309 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 MARCH2Q9P0N8 246 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 TFIP11Q9UBB9 837 aaKnown RBP10.36□□□□□ -0.75
CLCN4-204ENST00000454850 STRIP2Q9ULQ0 834 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 PLA2G4CQ9UP65 541 aa10.36□□□□□ -0.75
CLCN4-204ENST00000454850 BOD1L1Q8NFC6 3051 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 TEX51A0A1B0GUA7 166 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 PYCARD-AS1I3L0S3 204 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 PAPSS1O43252 624 aaPredicted RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 TIMM44O43615 452 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 STX6O43752 255 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 DFNA5O60443 496 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 BRINP1O60477 761 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 IGHV4-34P06331 123 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 HOXD9P28356 352 aaPredicted RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 HLA-FP30511 346 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 ACADVLP49748 655 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 AP3M2P53677 418 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 SNRPFP62306 86 aaKnown RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 E2F4Q16254 413 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 TAF1BQ53T94 588 aaPredicted RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 ZNF776Q68DI1 518 aaPredicted RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 KIAA0895LQ68EN5 471 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 LSM14AQ8ND56 463 aaKnown RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 NAF1Q96HR8 494 aaKnown RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 USP28Q96RU2 1077 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 CDK5RAP1Q96SZ6 601 aaKnown RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 ELF4Q99607 663 aaPredicted RBP10.35□□□□□ -0.75
CLCN4-204ENST00000454850 ORAI3Q9BRQ5 295 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 SLC2A11Q9BYW1 496 aa10.35□□□□□ -0.75
CLCN4-204ENST00000454850 BLZF1Q9H2G9 400 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms