RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 KCTD10Q9H3F6 313 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 CYP3A43Q9HB55 503 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.55□□□□□ -0.24
PTPA-224ENST00000453358 SNX11Q9Y5W9 270 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 A0A087WV48 116 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 FAM149AA5PLN7 773 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 TIMM44O43615 452 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 KIF20AO95235 890 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 CYBBP04839 570 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 HLA-EP13747 358 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 ACSL1P33121 698 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 GRK6P43250 576 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 SMAD1Q15797 465 aaKnown RBP13.54□□□□□ -0.24
PTPA-224ENST00000453358 PPP1R26Q5T8A7 1209 aaPredicted RBP13.54□□□□□ -0.24
PTPA-224ENST00000453358 SCUBE3Q8IX30 993 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 FAM217AQ8IXS0 508 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 DDI1Q8WTU0 396 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 CRELD1Q96HD1 420 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 ZNF396Q96N95 335 aaPredicted RBP13.54□□□□□ -0.24
PTPA-224ENST00000453358 LHX5Q9H2C1 402 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 TM9SF3Q9HD45 589 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 OSGEPQ9NPF4 335 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 MARCH2Q9P0N8 246 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 ANKRD6Q9Y2G4 727 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 KNTC1P50748 2209 aa13.54□□□□□ -0.24
PTPA-224ENST00000453358 SLC12A8A0AV02 714 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 PDXKO00764 312 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 KCNK3O14649 394 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 TNFSF14O43557 240 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 CD58P19256 250 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 GRIA4P48058 902 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 TEAD4Q15561 434 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 LAYNQ6UX15 382 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
PTPA-224ENST00000453358 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 IGSF8Q969P0 613 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 IMPG2Q9BZV3 1241 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 NIF3L1Q9GZT8 377 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 STRIP2Q9ULQ0 834 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 ATMQ13315 3056 aa13.53□□□□□ -0.24
PTPA-224ENST00000453358 MGAQ8IWI9 3026 aa13.52□□□□□ -0.24
PTPA-224ENST00000453358 EIF4E1BA6NMX2 242 aaKnown RBP13.52□□□□□ -0.25
PTPA-224ENST00000453358 H0Y8X5 98 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 PCDHGA12O60330 932 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 TSPAN3O60637 253 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 SEMA4FO95754 770 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 HOXD9P28356 352 aaPredicted RBP13.52□□□□□ -0.25
PTPA-224ENST00000453358 HLA-FP30511 346 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 CCT8P50990 548 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 YWHAGP61981 247 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPA-224ENST00000453358 ARID5AQ03989 594 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 FNDC3BQ53EP0 1204 aaKnown RBP13.52□□□□□ -0.25
PTPA-224ENST00000453358 KCNT1Q5JUK3 1230 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 RESP18Q5W5W9 173 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 DHRS13Q6UX07 377 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 RSRC2Q7L4I2 434 aaKnown RBP13.52□□□□□ -0.25
PTPA-224ENST00000453358 ARHGAP18Q8N392 663 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 ZNF366Q8N895 744 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 CYB5D2Q8WUJ1 264 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 PLD4Q96BZ4 506 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 BIRC7Q96CA5 298 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 ARID3AQ99856 593 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 ORAI3Q9BRQ5 295 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 EXOC1Q9NV70 894 aa13.52□□□□□ -0.25
PTPA-224ENST00000453358 TMEM131Q92545 1883 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 MUC22E2RYF6 1773 aaPredicted RBP13.51□□□□□ -0.25
PTPA-224ENST00000453358 MAPK13O15264 365 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 FSBPO95073 299 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 TRIM49P0CI25 452 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 TRIM49CP0CI26 452 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 CD27P26842 260 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 CTSKP43235 329 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 GCLMP48507 274 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 VAMP7P51809 220 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 RPS14P62263 151 aaKnown RBP13.51□□□□□ -0.25
PTPA-224ENST00000453358 PPP3CAQ08209 521 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 TRIP4Q15650 581 aaPredicted RBP13.51□□□□□ -0.25
PTPA-224ENST00000453358 KMT5BQ4FZB7 885 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 MPPE1Q53F39 396 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 CCDC157Q569K6 752 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 RAB41Q5JT25 222 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 PIGZQ86VD9 579 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 WFIKKN2Q8TEU8 576 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 UBXN6Q9BZV1 441 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 BTBD1Q9H0C5 482 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 PRSS16Q9NQE7 514 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 SERTAD1Q9UHV2 236 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 PCDHA7Q9UN72 937 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 FRMD4BQ9Y2L6 1034 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 TENM4Q6N022 2769 aa13.51□□□□□ -0.25
PTPA-224ENST00000453358 E9PAM4 449 aa13.5□□□□□ -0.25
PTPA-224ENST00000453358 PAPSS1O43252 624 aaPredicted RBP13.5□□□□□ -0.25
PTPA-224ENST00000453358 ACTN4O43707 911 aaKnown RBP13.5□□□□□ -0.25
PTPA-224ENST00000453358 SLFN14P0C7P3 912 aa13.5□□□□□ -0.25
PTPA-224ENST00000453358 IL9RQ01113 521 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms