RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 TAC4Q86UU9 113 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 CPNE8Q86YQ8 564 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 ARHGAP18Q8N392 663 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 RXFP2Q8WXD0 754 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 NT5C3BQ969T7 300 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 ZNF653Q96CK0 615 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 NPY6RQ99463 290 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 POPDC2Q9HBU9 364 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 WDR35Q9P2L0 1181 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 SALL4Q9UJQ4 1053 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 TRAV19A0A0A6YYK7 116 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 TMEM191CA6NGB0 347 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 SOBPA7XYQ1 873 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 I6L893 689 aaPredicted RBP16.32■□□□□ 0.2
VCX3B-204ENST00000453306 SCAMP3O14828 347 aaKnown RBP16.32■□□□□ 0.2
VCX3B-204ENST00000453306 SART1O43290 800 aaKnown RBP16.32■□□□□ 0.2
VCX3B-204ENST00000453306 HSF2BPO75031 334 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 DAB1O75553 588 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 KLKB1P03952 638 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 KRT3P12035 628 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 NCAM1P13591 858 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 DDX6P26196 483 aaKnown RBP eCLIP16.32■□□□□ 0.2
VCX3B-204ENST00000453306 WEE1P30291 646 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 MAGEA1P43355 309 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 CXCL12P48061 93 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 ATXN1P54253 815 aaKnown RBP16.32■□□□□ 0.2
VCX3B-204ENST00000453306 DCAF6Q58WW2 860 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 KLHDC10Q6PID8 442 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 ARCQ7LC44 396 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 ARFGAP1Q8N6T3 406 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 CFAP57Q96MR6 1250 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 GCNAQ96QF7 691 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 ANLNQ9NQW6 1124 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 OBP2AQ9NY56 170 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 DNMT3LQ9UJW3 386 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 CDV3Q9UKY7 258 aaKnown RBP16.32■□□□□ 0.2
VCX3B-204ENST00000453306 STRIP2Q9ULQ0 834 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 ARHGAP26Q9UNA1 814 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 CPQQ9Y646 472 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 DUSP10Q9Y6W6 482 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 FRYLO94915 3013 aa16.32■□□□□ 0.2
VCX3B-204ENST00000453306 DMXL1Q9Y485 3027 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 MED19A0JLT2 244 aaPredicted RBP16.31■□□□□ 0.2
VCX3B-204ENST00000453306 TMEM253P0C7T8 217 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 CHRNB1P11230 501 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 RALAP11233 206 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 NOS2P35228 1153 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 ATP5C1P36542 298 aaKnown RBP16.31■□□□□ 0.2
VCX3B-204ENST00000453306 MATKP42679 507 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 SNX16P57768 344 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 FCHO2Q0JRZ9 810 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 C15orf59Q2T9L4 293 aaPredicted RBP16.31■□□□□ 0.2
VCX3B-204ENST00000453306 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 LAIR1Q6GTX8 287 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 DNAJC24Q6P3W2 148 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 MIB1Q86YT6 1006 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 SPEM1Q8N4L4 309 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 SH3RF2Q8TEC5 729 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 P2RY11Q96G91 374 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 BTBD6Q96KE9 485 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 MCEEQ96PE7 176 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 TBCBQ99426 244 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.31■□□□□ 0.2
VCX3B-204ENST00000453306 MARCH2Q9P0N8 246 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 RASAL2Q9UJF2 1139 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 ADGRG1Q9Y653 693 aa16.31■□□□□ 0.2
VCX3B-204ENST00000453306 SLC12A8A0AV02 714 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 GOLGA6L6A8MZA4 724 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 LEFTY2O00292 366 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 ARNTLO00327 626 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 TRUB2O95900 331 aaKnown RBP16.3■□□□□ 0.2
VCX3B-204ENST00000453306 IGLV3-27P01718 113 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 CKMP06732 381 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 HMBSP08397 361 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 MYBL1P10243 752 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 MBL2P11226 248 aaPredicted RBP16.3■□□□□ 0.2
VCX3B-204ENST00000453306 TDGF1P13385 188 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 PFKLP17858 780 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 CNR2P34972 360 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 CYLC1P35663 651 aaPredicted RBP16.3■□□□□ 0.2
VCX3B-204ENST00000453306 DGKKQ5KSL6 1271 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 ARTNQ5T4W7 220 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 RALGPS2Q86X27 583 aaPredicted RBP16.3■□□□□ 0.2
VCX3B-204ENST00000453306 CENPIQ92674 756 aaPredicted RBP16.3■□□□□ 0.2
VCX3B-204ENST00000453306 SLC39A13Q96H72 371 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 SELENOOQ9BVL4 669 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 OSGEPQ9NPF4 335 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 TDP1Q9NUW8 608 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 PARVAQ9NVD7 372 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
VCX3B-204ENST00000453306 TRIM10Q9UDY6 481 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 ZMYM5Q9UJ78 669 aa16.3■□□□□ 0.2
VCX3B-204ENST00000453306 LRP3O75074 770 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 STC2O76061 302 aa16.29■□□□□ 0.2
VCX3B-204ENST00000453306 ENDOD1O94919 500 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms