RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ODF2Q5BJF6 829 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PPP6R3Q5H9R7 873 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 BRMS1LQ5PSV4 323 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 MANEALQ5VSG8 457 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PLPP4Q5VZY2 271 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 DUPD1Q68J44 220 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 NCBP2-AS2Q69YL0 99 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 FBXO38Q6PIJ6 1188 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 NPNTQ6UXI9 565 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 MAATS1Q7Z4T9 603 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 JAMLQ86YT9 394 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TTC13Q8NBP0 860 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PDZD8Q8NEN9 1154 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ATL2Q8NHH9 583 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ACTL9Q8TC94 416 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 RNF139Q8WU17 664 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 SLC22A17Q8WUG5 538 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PSMG2Q969U7 264 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 HAUS1Q96CS2 278 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 FCRL2Q96LA5 508 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 RUNDC3BQ96NL0 473 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 SAMD11Q96NU1 681 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 SERPINB11Q96P15 392 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 CSPG4P5Q96PW8 444 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TGS1Q96RS0 853 aaKnown RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 HAPLN3Q96S86 360 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ERP44Q9BS26 406 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TRIM51Q9BSJ1 452 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 FRMD8P1Q9BZ68 369 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TKTL2Q9H0I9 626 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 CCSER2Q9H7U1 834 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 IL21Q9HBE4 155 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 EPB41L5Q9HCM4 733 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ZNF334Q9HCZ1 680 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TLR9Q9NR96 1032 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 OLA1Q9NTK5 396 aaKnown RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ETNK2Q9NVF9 386 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TMEM51Q9NW97 253 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 RCOR3Q9P2K3 495 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 MAGED2Q9UNF1 606 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 NEU3Q9UQ49 428 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TLR6Q9Y2C9 796 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 MFHAS1Q9Y4C4 1052 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TNRC18O15417 2968 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 KIF26AQ9ULI4 1882 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PRRC2BQ5JSZ5 2229 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ESYT3A0FGR9 886 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC151A5D8V7 595 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 H3BRJ5 948 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 EEF2KO00418 725 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 NRG2O14511 850 aaPredicted RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PRRG1O14668 218 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 APOL1O14791 398 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 TP73O15350 636 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 DAPK3O43293 454 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 TLR5O60602 858 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 CLASP2O75122 1294 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PAGE1O75459 146 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ITGAVP06756 1048 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ADH1AP07327 375 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 C8AP07357 584 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ERCC2P18074 760 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 TGM2P21980 687 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 KLRC2P26717 231 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ECHS1P30084 290 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 HOXC13P31276 330 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 CCR1P32246 355 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ARL4AP40617 200 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 CLCN6P51797 869 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 EPHB3P54753 998 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 VCPP55072 806 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 MLLT6P55198 1093 aaPredicted RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 TBX4P57082 545 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 NRG1Q02297 640 aaPredicted RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 RING1Q06587 406 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 EFEMP1Q12805 493 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PLD1Q13393 1074 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 NNTQ13423 1086 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 GPM6BQ13491 265 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PTK6Q13882 451 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 BYSLQ13895 437 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 VEPH1Q14D04 833 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PAFAH1B3Q15102 231 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ARL13BQ3SXY8 428 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 EFHC2Q5JST6 749 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 C10orf120Q5SQS8 335 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 BEND6Q5SZJ8 279 aaPredicted RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC70Q6NSX1 233 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 KLHDC10Q6PID8 442 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 C1orf228Q6PIY5 440 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 RFX8Q6ZV50 586 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 SND1Q7KZF4 910 aaKnown RBP eCLIP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 C14orf80Q86SX3 495 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PRUNE1Q86TP1 453 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 DDX42Q86XP3 938 aaKnown RBP eCLIP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 TMC8Q8IU68 726 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 IFT20Q8IY31 132 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC105Q8IYK2 499 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms