RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 SMAPO00193 183 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 RNF103O00237 685 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 RFX8Q6ZV50 586 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 MRPL10Q7Z7H8 261 aaKnown RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 ZNF280BQ86YH2 543 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 RAET1EQ8TD07 263 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 DCAKDQ8WVC6 231 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 QKIQ96PU8 341 aaKnown RBP eCLIP12.16□□□□□ -0.46
VTA1-203ENST00000452973 SIK2Q9H0K1 926 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 CCDC134Q9H6E4 229 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 CXorf49A8MYA2 514 aaPredicted RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 ALDH1A1P00352 501 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 SRGAP2BP0DMP2 458 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 SESN2P58004 480 aaPredicted RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 TPI1P60174 286 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 FAAP100Q0VG06 881 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 TUSC3Q13454 348 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 OLIG2Q13516 323 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 SPARCL1Q14515 664 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 FAM133BQ5BKY9 247 aaKnown RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 CCSAPQ6IQ19 270 aaPredicted RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 ADGRD1Q6QNK2 874 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 NT5C3BQ969T7 300 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 PGBD4Q96DM1 585 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 RTP4Q96DX8 246 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 GLT1D1Q96MS3 346 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 SLC2A13Q96QE2 648 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 WDCPQ9H6R7 721 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 SLCO1B3Q9NPD5 702 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 CNGB3Q9NQW8 809 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 GRID1Q9ULK0 1009 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 ACTL7BQ9Y614 415 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 TTC3P53804 2025 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
VTA1-203ENST00000452973 SNX3O60493 162 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 UGT1A9O60656 530 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 FBXO21O94952 628 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 MT-ND3P03897 115 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 ERCC2P18074 760 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 RAB27AP51159 221 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 PID1Q7Z2X4 250 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 ECHDC2Q86YB7 292 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 SCN4BQ8IWT1 228 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 RSPH1Q8WYR4 309 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 SGSM3Q96HU1 749 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 PITPNM3Q9BZ71 974 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 TKTL2Q9H0I9 626 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 UGT1A7Q9HAW7 530 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 UGT1A10Q9HAW8 530 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 UGT1A8Q9HAW9 530 aa12.16□□□□□ -0.46
VTA1-203ENST00000452973 DNM1LO00429 736 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 B4GALT3O60512 393 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 ZNF623O75123 536 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 GCATO75600 419 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 GRIK1P39086 918 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 OR1G1P47890 313 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 XRCC4Q13426 336 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 SDHAF4Q5VUM1 108 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 TRMT10BQ6PF06 316 aaKnown RBP12.15□□□□□ -0.46
VTA1-203ENST00000452973 VSIG1Q86XK7 387 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 UNC5BQ8IZJ1 945 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 PPM1EQ8WY54 764 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 MAGEB18Q96M61 343 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 PGLYRP2Q96PD5 576 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 HHLA1C9JL84 531 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 CKBP12277 381 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 TAC1P20366 129 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 ADRA1DP25100 572 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 PSMB4P28070 264 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 GRIK3Q13003 919 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 BMPR2Q13873 1038 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 DSC3Q14574 896 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 INTS6LQ5JSJ4 861 aaKnown RBP12.15□□□□□ -0.46
VTA1-203ENST00000452973 FBXW10Q5XX13 1052 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 TCP10LQ8TDR4 215 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 WDR6Q9NNW5 1121 aaKnown RBP12.15□□□□□ -0.46
VTA1-203ENST00000452973 ABCF3Q9NUQ8 709 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 SLC17A7Q9P2U7 560 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 PTCH2Q9Y6C5 1203 aa12.15□□□□□ -0.46
VTA1-203ENST00000452973 NUP205Q92621 2012 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 USP12O75317 370 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 DGKIO75912 1065 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 STK10O94804 968 aaKnown RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 ASMTLO95671 621 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 NEFHP12036 1026 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 EPHB2P29323 1055 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 RWDD4Q6NW29 188 aaKnown RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 RTN4RL1Q86UN2 441 aaPredicted RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 CEP57Q86XR8 500 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 THEM5Q8N1Q8 247 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 CELF6Q96J87 481 aaKnown RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 SPATA13Q96N96 652 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms