RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
COL9A3-202ENST00000452372 AZIN2Q96A70 460 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 SLC39A13Q96H72 371 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 STOML2Q9UJZ1 356 aa20.76■□□□□ 0.91
COL9A3-202ENST00000452372 SMG5Q9UPR3 1016 aaKnown RBP20.76■□□□□ 0.91
COL9A3-202ENST00000452372 FAM170AA1A519 330 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 DAB1O75553 588 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 PAPSS2O95340 614 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 IGLV3-25P01717 112 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 TNFAIP3P21580 790 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 NOS2P35228 1153 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 NSFP46459 744 aaKnown RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 SLC6A11P48066 632 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 NRLP54845 237 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 ZBED6P86452 979 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 CDK17Q00537 523 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 EIF4EBP2Q13542 120 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 FAM102AQ5T9C2 384 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 MMS22LQ6ZRQ5 1243 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 TPGS1Q6ZTW0 290 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 ERMP1Q7Z2K6 904 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 PHF13Q86YI8 300 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 CPXM2Q8N436 756 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 ADAM32Q8TC27 787 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 FCRL2Q96LA5 508 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 HINFPQ9BQA5 517 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 HAUS4Q9H6D7 363 aa20.75■□□□□ 0.91
COL9A3-202ENST00000452372 SEPT11Q9NVA2 429 aaKnown RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 LUC7L2Q9Y383 392 aaKnown RBP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.75■□□□□ 0.91
COL9A3-202ENST00000452372 IRAK2O43187 625 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 HRO43593 1189 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 GYPCP04921 128 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 GBP1P32455 592 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 MATKP42679 507 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 RNASE9P60153 205 aaKnown RBP20.74■□□□□ 0.91
COL9A3-202ENST00000452372 PITX1P78337 314 aaPredicted RBP20.74■□□□□ 0.91
COL9A3-202ENST00000452372 PTP4A2Q12974 167 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 ARCQ7LC44 396 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 ETFBKMTQ8IXQ9 262 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 OLIG1Q8TAK6 271 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 CPLX3Q8WVH0 158 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 PNKPQ96T60 521 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 C11orf70Q9BRQ4 267 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 BBS2Q9BXC9 721 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 DLL3Q9NYJ7 618 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 RRN3Q9NYV6 651 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 ADAM22Q9P0K1 906 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 NCOR2Q9Y618 2525 aa20.74■□□□□ 0.91
COL9A3-202ENST00000452372 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-202ENST00000452372 NEDD8-MDP1E9PL57 170 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 GOLGA8SH3BPF8 625 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 EGFP01133 1207 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 TYRP14679 529 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 KLHL30Q0D2K2 578 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 ADGRF1Q5T601 910 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 SPECC1LQ69YQ0 1117 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 SARM1Q6SZW1 724 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 ZNF571Q7Z3V5 609 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-202ENST00000452372 C12orf40Q86WS4 652 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 NAT16Q8N8M0 369 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.73■□□□□ 0.91
COL9A3-202ENST00000452372 TMEM59LQ9UK28 342 aa20.73■□□□□ 0.91
COL9A3-202ENST00000452372 A0A0A0MRY4 1105 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 CHURC1-FNTBB4DL54 471 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 GFRA2O00451 464 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 CACNG3O60359 315 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 ACSL4O60488 711 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 TULP3O75386 442 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 PENKP01210 267 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-202ENST00000452372 CALB1P05937 261 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 SKILP12757 684 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 CASP14P31944 242 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 SLC11A2P49281 568 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 FNTBP49356 437 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 C1QBPQ07021 282 aaKnown RBP20.72■□□□□ 0.91
COL9A3-202ENST00000452372 FBXO43Q4G163 708 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 FYB2Q5VWT5 728 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 ACAD10Q6JQN1 1059 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 PKN3Q6P5Z2 889 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 VSTM4Q8IW00 320 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 EZH1Q92800 747 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-202ENST00000452372 NT5C3BQ969T7 300 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 P2RY11Q96G91 374 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 XPO6Q96QU8 1125 aaKnown RBP20.72■□□□□ 0.91
COL9A3-202ENST00000452372 NPY6RQ99463 290 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 IRX2Q9BZI1 471 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-202ENST00000452372 RBSNQ9H1K0 784 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 FAM204AQ9H8W3 233 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 PARD6AQ9NPB6 346 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL9A3-202ENST00000452372 DDIT4Q9NX09 232 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 DEC1Q9P2X7 70 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 NCDNQ9UBB6 729 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 STAP1Q9ULZ2 295 aa20.72■□□□□ 0.91
COL9A3-202ENST00000452372 BZW2Q9Y6E2 419 aaKnown RBP20.72■□□□□ 0.91
COL9A3-202ENST00000452372 CYBBP04839 570 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 FLT3P36888 993 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 GSCP56915 257 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-202ENST00000452372 PPP2R5DQ14738 602 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms