RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 CEP63Q96MT8 703 aa28.33■■■□□ 2.13
USP42-204ENST00000451154 SLC2A11Q9BYW1 496 aa28.33■■■□□ 2.13
USP42-204ENST00000451154 HBS1LQ9Y450 684 aaKnown RBP28.33■■■□□ 2.13
USP42-204ENST00000451154 PIK3R2O00459 728 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 SYNCRIPO60506 623 aaKnown RBP28.32■■■□□ 2.12
USP42-204ENST00000451154 TOP3BO95985 862 aaKnown RBP28.32■■■□□ 2.12
USP42-204ENST00000451154 SETSIPP0DME0 302 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 MAOBP27338 520 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 PMF1Q6P1K2 205 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 TMPRSS6Q8IU80 811 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 RBBP8NLQ8NC74 664 aaPredicted RBP28.32■■■□□ 2.12
USP42-204ENST00000451154 OR2I1PQ8NGU4 316 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 NT5C1BQ96P26 610 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 ZSWIM1Q9BR11 485 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 CNGB3Q9NQW8 809 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 ITM2CQ9NQX7 267 aa28.32■■■□□ 2.12
USP42-204ENST00000451154 MSI1O43347 362 aaKnown RBP28.31■■■□□ 2.12
USP42-204ENST00000451154 PAEPP09466 180 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 SPINK2P20155 84 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 CD6P30203 668 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 DAOAP59103 153 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 MPPE1Q53F39 396 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 RABEPKQ7Z6M1 372 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 METTL3Q86U44 580 aaKnown RBP28.31■■■□□ 2.12
USP42-204ENST00000451154 PPM1KQ8N3J5 372 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 SLC35F5Q8WV83 523 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 TOE1Q96GM8 510 aaKnown RBP28.31■■■□□ 2.12
USP42-204ENST00000451154 ABCC13Q9NSE7 274 aa28.31■■■□□ 2.12
USP42-204ENST00000451154 KCNJ18B7U540 433 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 ARHGAP33O14559 1287 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 PMM2O15305 246 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 TIMM44O43615 452 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 PRKCHP24723 683 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 HOXD9P28356 352 aaPredicted RBP28.3■■■□□ 2.12
USP42-204ENST00000451154 ZNF132P52740 706 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 SEMA3BQ13214 749 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 CNGA2Q16280 664 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 SYCP2LQ5T4T6 812 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 HDDC3Q8N4P3 179 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 LMO3Q8TAP4 145 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 TMA16Q96EY4 203 aaKnown RBP28.3■■■□□ 2.12
USP42-204ENST00000451154 SIPA1Q96FS4 1042 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 SLC32A1Q9H598 525 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 WSB2Q9NYS7 404 aaPredicted RBP28.3■■■□□ 2.12
USP42-204ENST00000451154 USP36Q9P275 1121 aaKnown RBP28.3■■■□□ 2.12
USP42-204ENST00000451154 WASF3Q9UPY6 502 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 CFAP47Q6ZTR5 3102 aa28.3■■■□□ 2.12
USP42-204ENST00000451154 PPP1R3GB7ZBB8 358 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 BMP6P22004 513 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 BRD2P25440 801 aaKnown RBP28.29■■■□□ 2.12
USP42-204ENST00000451154 ARID5AQ03989 594 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 EIF4HQ15056 248 aaKnown RBP28.29■■■□□ 2.12
USP42-204ENST00000451154 PLEKHG6Q3KR16 790 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 ADGRF1Q5T601 910 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 TTI2Q6NXR4 508 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 RRAGAQ7L523 313 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 PIP4P1Q86T03 277 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 ELOA2Q8IYF1 753 aaPredicted RBP28.29■■■□□ 2.12
USP42-204ENST00000451154 SCML4Q8N228 414 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 MINDY1Q8N5J2 469 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 NELFBQ8WX92 580 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 FOXJ1Q92949 421 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 GPR174Q9BXC1 333 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 STOML2Q9UJZ1 356 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.29■■■□□ 2.12
USP42-204ENST00000451154 PCDH15Q96QU1 1955 aa28.29■■■□□ 2.12
USP42-204ENST00000451154 CKAP5Q14008 2032 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 AKAP13Q12802 2813 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 OPHN1O60890 802 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 EPHX1P07099 455 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 NCAM1P13591 858 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 HLA-FP30511 346 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 TPMTP51580 245 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 CLEC4CQ8WTT0 213 aa28.28■■■□□ 2.12
USP42-204ENST00000451154 SPAARA0A1B0GVQ0 90 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 M0QYV0 167 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 SYPP08247 313 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 HLA-EP13747 358 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 SGSHP51688 502 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 COPAP53621 1224 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 CETN1Q12798 172 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 E2F5Q15329 346 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 WDR45BQ5MNZ6 344 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 SERPINA13PQ6UXR4 307 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 CACUL1Q86Y37 369 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 ARHGEF19Q8IW93 802 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 CYB5D2Q8WUJ1 264 aa28.27■■■□□ 2.12
USP42-204ENST00000451154 PRCCQ92733 491 aaPredicted RBP28.27■■■□□ 2.12
USP42-204ENST00000451154 GOLGA6L7A0A1B0GV03 622 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 UPK3BL1B0FP48 263 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 UPK3BL2E5RIL1 263 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 BIN1O00499 593 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 PPP1R2P41236 205 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 MSANTD2Q6P1R3 559 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 RFWD3Q6PCD5 774 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 EHBP1Q8NDI1 1231 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 IRGQQ8WZA9 623 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 ABCB8Q9NUT2 735 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 CTNND2Q9UQB3 1225 aa28.26■■■□□ 2.11
USP42-204ENST00000451154 KNL1Q8NG31 2342 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms