RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MTA1Q13330 715 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 EP400NLQ6ZTU2 488 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 SMRP1Q8NCR6 262 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 EXD1Q8NHP7 514 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 ADAMTS19Q8TE59 1207 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 ING5Q8WYH8 240 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 HSPH1Q92598 858 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 ACSF2Q96CM8 615 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-203ENST00000449049 HAPLN3Q96S86 360 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 TMPRSS4Q9NRS4 437 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 GKN1Q9NS71 199 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHMT2-203ENST00000449049 GPATCH2LQ9NWQ4 482 aa14.58□□□□□ -0.08
SHMT2-203ENST00000449049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-203ENST00000449049 STC2O76061 302 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 HMBSP08397 361 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 AVPR1AP37288 418 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 MTHFRP42898 656 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 KCNQ1P51787 676 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 DPYSL2Q16555 572 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 CA9Q16790 459 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 UNC45BQ8IWX7 931 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 NPAS3Q8IXF0 933 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 ZSWIM3Q96MP5 696 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 OSBPL9Q96SU4 736 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 CARD9Q9H257 536 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 SMPD4Q9NXE4 827 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 CD207Q9UJ71 328 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-203ENST00000449049 CES2O00748 559 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 KCNK3O14649 394 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 PAGE1O75459 146 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 KRT1P04264 644 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 TCP1P17987 556 aaKnown RBP14.57□□□□□ -0.08
SHMT2-203ENST00000449049 RCOR2Q8IZ40 523 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 ATP6V0D2Q8N8Y2 350 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 KIF18AQ8NI77 898 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 RAPGEF5Q92565 580 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF592Q92610 1267 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 AZIN2Q96A70 460 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 BTN2A3PQ96KV6 586 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 PSMB7Q99436 277 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 OSBPL2Q9H1P3 480 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 SLITRK6Q9H5Y7 841 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 KLHL11Q9NVR0 708 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 SAR1BQ9Y6B6 198 aa14.57□□□□□ -0.08
SHMT2-203ENST00000449049 GREM1O60565 184 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 ZRANB2O95218 330 aaKnown RBP eCLIP14.56□□□□□ -0.081e-7■□□□□ 9.4
SHMT2-203ENST00000449049 PYGMP11217 842 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 TCF3P15923 654 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 KDELR1P24390 212 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 L1CAMP32004 1257 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 HARS2P49590 506 aaKnown RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 SEMA3BQ13214 749 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 PDK2Q15119 407 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 GET4Q7L5D6 327 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 VSIG1Q86XK7 387 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 DDX42Q86XP3 938 aaKnown RBP eCLIP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 SUSD6Q92537 303 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 FGF13Q92913 245 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 USP13Q92995 863 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 WBP2Q969T9 261 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 RBM41Q96IZ5 413 aaKnown RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 NECTIN4Q96NY8 510 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 MAGEB5Q9BZ81 275 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 DHX35Q9H5Z1 703 aaKnown RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 GDE1Q9NZC3 331 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 SLC12A6Q9UHW9 1150 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 XPO7Q9UIA9 1087 aaKnown RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 PRAMEF12O95522 483 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 LATS1O95835 1130 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 MOCS2O96007 188 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 KLKB1P03952 638 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 CORO1AP31146 461 aaKnown RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 CXCR5P32302 372 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 CDH6P55285 790 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 NRG1Q02297 640 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 CBX2Q14781 532 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 CCDC85BQ15834 202 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 TAZQ16635 292 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 ZFYVE27Q5T4F4 411 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 ACBD5Q5T8D3 534 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 PYROXD2Q8N2H3 581 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 KCTD6Q8NC69 237 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 TSC1Q92574 1164 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 PBKQ96KB5 322 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 C1orf74Q96LT6 269 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 KCTD15Q96SI1 283 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 UBE2ZQ9H832 354 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-203ENST00000449049 PCDH18Q9HCL0 1135 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 TDP1Q9NUW8 608 aa14.56□□□□□ -0.08
SHMT2-203ENST00000449049 MYO9BQ13459 2157 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 LRRD1A4D1F6 860 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF487B1APH4 448 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 PI4K2BG5E9Z4 385 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 LEFTY2O00292 366 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 CD48P09326 243 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 IRF1P10914 325 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 PTPN7P35236 360 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms