RNA–Protein interactions for RNA: ENST00000448753.5

DEPDC5-209, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best)

Gene DEPDC5, Length 3,260 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-209ENST00000448753 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 ANKRD36BP1Q96IX9 119 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 SRPK1Q96SB4 655 aaKnown RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 PRPF18Q99633 342 aaKnown RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 C20orf27Q9GZN8 174 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 RGPD3A6NKT7 1758 aaPredicted RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 RGPD4Q7Z3J3 1758 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 A0A088AWK7 358 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 CAPN14A8MX76 684 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 PDLIM1O00151 329 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 PHKA2P46019 1235 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 YWHAZP63104 245 aaKnown RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 KRT81Q14533 505 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 KLHL38Q2WGJ6 581 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 LRRC8BQ6P9F7 803 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 FAM183BPQ6ZVS7 135 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 ZBTB8OSQ8IWT0 167 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 DHRS4Q9BTZ2 278 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 AS3MTQ9HBK9 375 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 MCM3APO60318 1980 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 APOC4-APOC2K7ER74 178 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 APOC2P02655 101 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 CSH1P0DML2 217 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 CSH2P0DML3 217 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 CDK4P11802 303 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 NELFEP18615 380 aaKnown RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 RGS2P41220 211 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 TLR1Q15399 786 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 C16orf46Q6P387 395 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 CYP4V2Q6ZWL3 525 aaPredicted RBP11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 SCUBE3Q8IX30 993 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 NIPA2Q8N8Q9 360 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 ZFP28Q8NHY6 868 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 PLAC1Q9HBJ0 212 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 ADAMTS5Q9UNA0 930 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 LZTS1Q9Y250 596 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
DEPDC5-209ENST00000448753 VTNP04004 478 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 TFAP2AP05549 437 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 ETV4P43268 484 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 CBX3Q13185 183 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 MPZL3Q6UWV2 235 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 PPP1R14CQ8TAE6 165 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 CLEC4CQ8WTT0 213 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 YIPF2Q9BWQ6 316 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 MRPL1Q9BYD6 325 aaKnown RBP11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 RPF1Q9H9Y2 349 aaKnown RBP11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 ZC3H7BQ9UGR2 993 aaKnown RBP11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 MAGED2Q9UNF1 606 aaPredicted RBP11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 A0A1B0GTW7 788 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 LYPLA1O75608 230 aaPredicted RBP11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 NDST1P52848 882 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 MPP3Q13368 585 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 DNAL1Q4LDG9 190 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 DCAF15Q66K64 600 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 EFCAB12Q6NXP0 572 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 GALNT4Q8N4A0 578 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 SEPT1Q8WYJ6 367 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 APOPT1Q96IL0 206 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 SIKE1Q9BRV8 207 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 ACSS2Q9NR19 701 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 STRIP2Q9ULQ0 834 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 TTLL3Q9Y4R7 772 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 BRCA2P51587 3418 aa11.12□□□□□ -0.63
DEPDC5-209ENST00000448753 IGKV6D-21A0A0A0MT36 114 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 SMIM31A0A1B0GVY4 71 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 E7ESA3 106 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 PPEF2O14830 753 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 ADORA2AP29274 412 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 CDH5P33151 784 aaPredicted RBP11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 ABCD1P33897 745 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 ZNF280AP59817 542 aaPredicted RBP11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 MYLK3Q32MK0 819 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 KLC3Q6P597 504 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 MOB2Q70IA6 237 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 POLNQ7Z5Q5 900 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 PCGF5Q86SE9 256 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 NUDCD3Q8IVD9 361 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 SLC44A1Q8WWI5 657 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 E2F7Q96AV8 911 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 SUDS3Q9H7L9 328 aaPredicted RBP11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 UBAP1Q9NZ09 502 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 PEX1O43933 1283 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 METTL18O95568 372 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 STAG3L1P0CL83 205 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 SMIM18P0DKX4 95 aa11.11□□□□□ -0.63
DEPDC5-209ENST00000448753 GPD2P43304 727 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms