RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 DNAH14Q0VDD8 3507 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 TIMM44O43615 452 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 SYNCRIPO60506 623 aaKnown RBP20.52■□□□□ 0.88
VCP-203ENST00000448530 NCAM1P13591 858 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 NDUFV2P19404 249 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 GPD2P43304 727 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 TBX4P57082 545 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 MEA1Q16626 185 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 ARHGAP44Q17R89 818 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 EXOC3L4Q17RC7 722 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 LYSMD4Q5XG99 296 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 DENND1BQ6P3S1 775 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 KIAA1324Q6UXG2 1013 aaKnown RBP20.52■□□□□ 0.88
VCP-203ENST00000448530 SCUBE3Q8IX30 993 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 ZNF606Q8WXB4 792 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 PIWIL1Q96J94 861 aaKnown RBP20.52■□□□□ 0.88
VCP-203ENST00000448530 ELOVL2Q9NXB9 296 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 APEX2Q9UBZ4 518 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 STOML2Q9UJZ1 356 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 CEP192Q8TEP8 1941 aa20.52■□□□□ 0.88
VCP-203ENST00000448530 NCOR2Q9Y618 2525 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 GTPBP10A4D1E9 387 aaKnown RBP20.51■□□□□ 0.87
VCP-203ENST00000448530 WASH3PC4AMC7 463 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 CAPN9O14815 690 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 SLC9A1P19634 815 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 RING1Q06587 406 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 GJB7Q6PEY0 223 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 STK32AQ8WU08 396 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 SERPINB11Q96P15 392 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 DDX50Q9BQ39 737 aaKnown RBP20.51■□□□□ 0.87
VCP-203ENST00000448530 NUP62CLQ9H1M0 184 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 THAP9Q9H5L6 903 aa20.51■□□□□ 0.87
VCP-203ENST00000448530 THAP10Q9P2Z0 257 aaPredicted RBP20.51■□□□□ 0.87
VCP-203ENST00000448530 IGLV3-27P01718 113 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 HOXD9P28356 352 aaPredicted RBP20.5■□□□□ 0.87
VCP-203ENST00000448530 PTGER3P43115 390 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 IRF2BP1Q8IU81 584 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 SYT12Q8IV01 421 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 WFIKKN2Q8TEU8 576 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 MRGPRX1Q96LB2 322 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 MED15Q96RN5 788 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 NUSAP1Q9BXS6 441 aaKnown RBP20.5■□□□□ 0.87
VCP-203ENST00000448530 IRX2Q9BZI1 471 aaPredicted RBP20.5■□□□□ 0.87
VCP-203ENST00000448530 CLEC4EQ9ULY5 219 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 CYP8B1Q9UNU6 501 aa20.5■□□□□ 0.87
VCP-203ENST00000448530 TNRC6BQ9UPQ9 1833 aaKnown RBP20.49■□□□□ 0.87
VCP-203ENST00000448530 LNP1A1A4G5 178 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 TYW5A2RUC4 315 aaKnown RBP20.49■□□□□ 0.87
VCP-203ENST00000448530 IRAK2O43187 625 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 ACSL4O60488 711 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 NDUFS2O75306 463 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 IL12RB1P42701 662 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 RPL34P49207 117 aaKnown RBP20.49■□□□□ 0.87
VCP-203ENST00000448530 ZNF234Q14588 700 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 MAN2A1Q16706 1144 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 FUT11Q495W5 492 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 SERPINA13PQ6UXR4 307 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 ZNF557Q8N988 423 aaPredicted RBP20.49■□□□□ 0.87
VCP-203ENST00000448530 DQX1Q8TE96 717 aaKnown RBP20.49■□□□□ 0.87
VCP-203ENST00000448530 SLC4A5Q9BY07 1137 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 PRDM16Q9HAZ2 1276 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 CD248Q9HCU0 757 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 PLA2G4CQ9UP65 541 aa20.49■□□□□ 0.87
VCP-203ENST00000448530 GON4LQ3T8J9 2241 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 IGHV1OR15-9A0A0B4J2B8 117 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 PATE3B3GLJ2 98 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
VCP-203ENST00000448530 PON1P27169 355 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 ERCC5P28715 1186 aaPredicted RBP20.48■□□□□ 0.87
VCP-203ENST00000448530 LMAN2Q12907 356 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 DPCR1Q3MIW9 517 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 TRIM61Q5EBN2 209 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 MPP7Q5T2T1 576 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 DAB2IPQ5VWQ8 1189 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 RFWD3Q6PCD5 774 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 CCDC117Q8IWD4 279 aaPredicted RBP20.48■□□□□ 0.87
VCP-203ENST00000448530 DEFB119Q8N690 84 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 SORCS1Q8WY21 1168 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 AZIN2Q96A70 460 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 SLC6A17Q9H1V8 727 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 TMEM9BQ9NQ34 198 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 ABCB8Q9NUT2 735 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 EVLQ9UI08 416 aaPredicted RBP20.48■□□□□ 0.87
VCP-203ENST00000448530 NAALADL1Q9UQQ1 740 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 TLR6Q9Y2C9 796 aa20.48■□□□□ 0.87
VCP-203ENST00000448530 CNOT1A5YKK6 2376 aaKnown RBP20.48■□□□□ 0.87
VCP-203ENST00000448530 C4orf47A7E2U8 309 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 BECN2A8MW95 431 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 E5RJQ4 531 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 PES1O00541 588 aaKnown RBP20.47■□□□□ 0.87
VCP-203ENST00000448530 TBL1XO60907 577 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 FYNP06241 537 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 EPHX1P07099 455 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 ITPKAP23677 461 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 HOXD12P35452 270 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 IRX4P78413 519 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 APBA1Q02410 837 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 PTK2Q05397 1052 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 ZNF33AQ06730 810 aa20.47■□□□□ 0.87
VCP-203ENST00000448530 NNTQ13423 1086 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms