RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 TRAPPC11Q7Z392 1133 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.15□□□□□ -0.95
NIPBL-202ENST00000448238 OR8H1Q8NGG4 311 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 ZHX1-C8orf76Q96EF9 292 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 TPD52L3Q96J77 140 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF184Q99676 751 aaPredicted RBP9.15□□□□□ -0.95
NIPBL-202ENST00000448238 STK32BQ9NY57 414 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 TAGLN3Q9UI15 199 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 C3orf18Q9UK00 162 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 MYO7AQ13402 2215 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 CPB1P15086 417 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 VAMP7P51809 220 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 OTUD3Q5T2D3 398 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DENND5BQ6ZUT9 1274 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DHRS7Q9Y394 339 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DRG2P55039 364 aaKnown RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 PEX3P56589 373 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ADAM8P78325 824 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ROR2Q01974 943 aaKnown RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 CBLBQ13191 982 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 FAM47AQ5JRC9 791 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DEF8Q6ZN54 512 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TDRD5Q8NAT2 981 aaKnown RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 OR2L5Q8NG80 312 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 CLPBQ9H078 707 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ANKZF1Q9H8Y5 726 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 CCNB1IP1Q9NPC3 277 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 RGS12O14924 1447 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 SPARCP09486 303 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 S100PP25815 95 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ALG10BQ5I7T1 473 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 LHFPL3Q86UP9 236 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 PABPC5Q96DU9 382 aaKnown RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 BPIFA3Q9BQP9 254 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 C11orf70Q9BRQ4 267 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF350Q9GZX5 532 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 AAR2Q9Y312 384 aaKnown RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 PECAM1P16284 738 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DPYSQ14117 519 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF548Q8NEK5 533 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ASB2Q96Q27 587 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DPY30Q9C005 99 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TBCCD1Q9NVR7 557 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ENTPD4Q9Y227 616 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 LYVE1Q9Y5Y7 322 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ZBTB5O15062 677 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 CSPG5O95196 566 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 NR3C1P04150 777 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TGM2P21980 687 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 RPL9P32969 192 aaKnown RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TCF7P36402 384 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ATP2C1P98194 919 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 HMBOX1Q6NT76 420 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 FAM160B2Q86V87 743 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 RAB43Q86YS6 212 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ANKMY2Q8IV38 441 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 IFNL3Q8IZI9 196 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TFB1MQ8WVM0 346 aaKnown RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 CLIC6Q96NY7 704 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 PI4K2AQ9BTU6 479 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 RXFP1Q9HBX9 757 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TMEM216Q9P0N5 145 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 EMILIN1Q9Y6C2 1016 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 M0R129 80 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 NR5A2O00482 541 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TPBGLP0DKB5 382 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF12P17014 697 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TNNI3P19429 210 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 SDC2P34741 201 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 HSD17B3P37058 310 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 MYBPC1Q00872 1141 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 TCEAL6Q6IPX3 200 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DPF3Q92784 378 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 BORCS5Q969J3 196 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 ACE2Q9BYF1 805 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-202ENST00000448238 HPF1Q9NWY4 346 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 GMIPQ9P107 970 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 DAGLAQ9Y4D2 1042 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 MDFIC2A0A1B0GVS7 189 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 CCNKO75909 580 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 HLA-DRAP01903 254 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 NR2F6P10588 404 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 GPR15P49685 360 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 RAB15P59190 212 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 FAM189A2Q15884 450 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 QRFPRQ96P65 431 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 SP140LQ9H930 580 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 VPS4AQ9UN37 437 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 STK36Q9NRP7 1315 aa9.14□□□□□ -0.95
NIPBL-202ENST00000448238 GSTT2BP0CG30 244 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PRLRP16471 622 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 PTGER2P43116 358 aa9.13□□□□□ -0.95
NIPBL-202ENST00000448238 MAZP56270 477 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 DDX39BQ13838 428 aaKnown RBP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 GPKOWQ92917 476 aaPredicted RBP eCLIP9.13□□□□□ -0.95
NIPBL-202ENST00000448238 BBS4Q96RK4 519 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms