RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 COX16Q9P0S2 106 aa25.99■■□□□ 1.75
UFD1-204ENST00000447868 VPS13AQ96RL7 3174 aa25.99■■□□□ 1.75
UFD1-204ENST00000447868 PRR23AA6NEV1 266 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 GOLGA6L19H0YKK7 550 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 IRAK2O43187 625 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 ACSL4O60488 711 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 LILRB5O75023 590 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 HOXD11P31277 338 aaPredicted RBP25.98■■□□□ 1.75
UFD1-204ENST00000447868 GABRB2P47870 512 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 ZC3H12AQ5D1E8 599 aaKnown RBP25.98■■□□□ 1.75
UFD1-204ENST00000447868 RFWD3Q6PCD5 774 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 SLC26A9Q7LBE3 791 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 ZDHHC17Q8IUH5 632 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 IL17RCQ8NAC3 791 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 TXNDC5Q8NBS9 432 aaKnown RBP25.98■■□□□ 1.75
UFD1-204ENST00000447868 MSANTD4Q8NCY6 345 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 SLC39A13Q96H72 371 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 CLEC4EQ9ULY5 219 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 DMDP11532 3685 aa25.98■■□□□ 1.75
UFD1-204ENST00000447868 DAB1O75553 588 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 CAVIN2O95810 425 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 CHRM1P11229 460 aaPredicted RBP25.97■■□□□ 1.75
UFD1-204ENST00000447868 SLC6A4P31645 630 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 RNASE9P60153 205 aaKnown RBP25.97■■□□□ 1.75
UFD1-204ENST00000447868 FAM133BQ5BKY9 247 aaKnown RBP25.97■■□□□ 1.75
UFD1-204ENST00000447868 NADSYN1Q6IA69 706 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 LONP2Q86WA8 852 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 XYLT1Q86Y38 959 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 TMA16Q96EY4 203 aaKnown RBP25.97■■□□□ 1.75
UFD1-204ENST00000447868 SEMA4AQ9H3S1 761 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 DDIT4Q9NX09 232 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 FBXO10Q9UK96 956 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 MMP17Q9ULZ9 603 aa25.97■■□□□ 1.75
UFD1-204ENST00000447868 PRRT4C9JH25 899 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 GOLGA8SH3BPF8 625 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 IGLV3-25P01717 112 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 LMNAP02545 664 aaKnown RBP25.96■■□□□ 1.75
UFD1-204ENST00000447868 APOEP02649 317 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 CYP1A1P04798 512 aaPredicted RBP25.96■■□□□ 1.75
UFD1-204ENST00000447868 HOXA6P31267 233 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 SGSHP51688 502 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 FANCCQ00597 558 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 FAM102AQ5T9C2 384 aaPredicted RBP25.96■■□□□ 1.75
UFD1-204ENST00000447868 ZNF513Q8N8E2 541 aaPredicted RBP25.96■■□□□ 1.75
UFD1-204ENST00000447868 ZNF397Q8NF99 534 aaPredicted RBP25.96■■□□□ 1.75
UFD1-204ENST00000447868 AZIN2Q96A70 460 aa25.96■■□□□ 1.75
UFD1-204ENST00000447868 SEPT11Q9NVA2 429 aaKnown RBP25.96■■□□□ 1.75
UFD1-204ENST00000447868 SGK1O00141 431 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 GFRA2O00451 464 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 HOXD9P28356 352 aaPredicted RBP25.95■■□□□ 1.74
UFD1-204ENST00000447868 GBP1P32455 592 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 ZNF445P59923 1031 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 NME3Q13232 169 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 SRSF5Q13243 272 aaKnown RBP25.95■■□□□ 1.74
UFD1-204ENST00000447868 NR1I3Q14994 352 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 EGFLAMQ63HQ2 1017 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 MMS22LQ6ZRQ5 1243 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 CAMKK1Q8N5S9 505 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 TSTD1Q8NFU3 115 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 SLC30A5Q8TAD4 765 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 RNF34Q969K3 372 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 PCDHB18PQ96TA0 734 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 DDX50Q9BQ39 737 aaKnown RBP25.95■■□□□ 1.74
UFD1-204ENST00000447868 XPO7Q9UIA9 1087 aaKnown RBP25.95■■□□□ 1.74
UFD1-204ENST00000447868 HCN2Q9UL51 889 aa25.95■■□□□ 1.74
UFD1-204ENST00000447868 MYO18AQ92614 2054 aaKnown RBP25.95■■□□□ 1.74
UFD1-204ENST00000447868 A0A1W2PQC6 194 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 TBL1XO60907 577 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 APBB3O95704 486 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 FERP16591 822 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 NOS2P35228 1153 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 GEN1Q17RS7 908 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 HSF5Q4G112 596 aaPredicted RBP25.94■■□□□ 1.74
UFD1-204ENST00000447868 EOGTQ5NDL2 527 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 PIK3R6Q5UE93 754 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 TRIM72Q6ZMU5 477 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 PHLDB2Q86SQ0 1253 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 WDR5BQ86VZ2 330 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 BAP1Q92560 729 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 NUCKS1Q9H1E3 243 aaKnown RBP25.94■■□□□ 1.74
UFD1-204ENST00000447868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.94■■□□□ 1.74
UFD1-204ENST00000447868 SLC27A6Q9Y2P4 619 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 STARD13Q9Y3M8 1113 aa25.94■■□□□ 1.74
UFD1-204ENST00000447868 ADAM23O75077 832 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 MATKP42679 507 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 WASP42768 502 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 NFKBIBQ15653 356 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 CRY1Q16526 586 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 TMEM92Q6UXU6 159 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 KCNV2Q8TDN2 545 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 AGPAT1Q99943 283 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 C11orf70Q9BRQ4 267 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 SLC2A11Q9BYW1 496 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.93■■□□□ 1.74
UFD1-204ENST00000447868 STIM2Q9P246 746 aa25.93■■□□□ 1.74
UFD1-204ENST00000447868 ZFHX2Q9C0A1 2572 aaPredicted RBP25.93■■□□□ 1.74
UFD1-204ENST00000447868 M0QYT0 321 aa25.92■■□□□ 1.74
UFD1-204ENST00000447868 HRO43593 1189 aa25.92■■□□□ 1.74
UFD1-204ENST00000447868 CCDC172P0C7W6 258 aa25.92■■□□□ 1.74
UFD1-204ENST00000447868 HNRNPLP14866 589 aaKnown RBP eCLIP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms