RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CAPN11Q9UMQ6 739 aa12.39□□□□□ -0.43
RFC4-208ENST00000447345 LUC7L2Q9Y383 392 aaKnown RBP12.39□□□□□ -0.43
RFC4-208ENST00000447345 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.39□□□□□ -0.431e-6■□□□□ 9.9
RFC4-208ENST00000447345 DOCK4Q8N1I0 1966 aa12.39□□□□□ -0.43
RFC4-208ENST00000447345 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.38□□□□□ -0.43
RFC4-208ENST00000447345 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
RFC4-208ENST00000447345 LAMTOR5O43504 91 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 CACNG3O60359 315 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 ACSL4O60488 711 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 KAT7O95251 611 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 CYBBP04839 570 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 APODP05090 189 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 CALB1P05937 261 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 PLEKP08567 350 aaPredicted RBP12.38□□□□□ -0.43
RFC4-208ENST00000447345 SLC6A4P31645 630 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 GBP1P32455 592 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 SCNN1AP37088 669 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 GGCXP38435 758 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 PRKCIP41743 596 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 MAGEA9P43362 315 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 TCF15Q12870 199 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 NNTQ13423 1086 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 CDO1Q16878 200 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 FAM133BQ5BKY9 247 aaKnown RBP12.38□□□□□ -0.43
RFC4-208ENST00000447345 ADGRF1Q5T601 910 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 FYB2Q5VWT5 728 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 NADSYN1Q6IA69 706 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 GRAMD4Q6IC98 578 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 TSSK4Q6SA08 328 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 CHSY1Q86X52 802 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 PHF13Q86YI8 300 aaPredicted RBP12.38□□□□□ -0.43
RFC4-208ENST00000447345 C1orf210Q8IVY1 113 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 VSTM4Q8IW00 320 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 ETFBKMTQ8IXQ9 262 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 JOSD2Q8TAC2 188 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 IQCDQ96DY2 449 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 SLC39A13Q96H72 371 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 TBCBQ99426 244 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
RFC4-208ENST00000447345 SELENOOQ9BVL4 669 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 NUCKS1Q9H1E3 243 aaKnown RBP12.38□□□□□ -0.43
RFC4-208ENST00000447345 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 WDR35Q9P2L0 1181 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
RFC4-208ENST00000447345 MUC22E2RYF6 1773 aaPredicted RBP12.38□□□□□ -0.43
RFC4-208ENST00000447345 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.436e-13■■■□□ 17.4
RFC4-208ENST00000447345 LATS1O95835 1130 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 RRM1P23921 792 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 EIF2DP41214 584 aaKnown RBP12.37□□□□□ -0.43
RFC4-208ENST00000447345 DGKGP49619 791 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 ATXN1P54253 815 aaKnown RBP12.37□□□□□ -0.43
RFC4-208ENST00000447345 ATP11AP98196 1134 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 SATB1Q01826 763 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 DEUP1Q05D60 604 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 MPPE1Q53F39 396 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 C10orf76Q5T2E6 689 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 HGSNATQ68CP4 663 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 ACAD10Q6JQN1 1059 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 DNAJC24Q6P3W2 148 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 TMC6Q7Z403 805 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 PHTF2Q8N3S3 785 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 RPLP0P6Q8NHW5 317 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 MYEOVQ96EZ4 313 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 PRICKLE1Q96MT3 831 aaPredicted RBP12.37□□□□□ -0.43
RFC4-208ENST00000447345 NPY6RQ99463 290 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 PIGVQ9NUD9 493 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 POLR3BQ9NW08 1133 aaPredicted RBP12.37□□□□□ -0.43
RFC4-208ENST00000447345 C2orf42Q9NWW7 574 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 STIM2Q9P246 746 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 CLEC4EQ9ULY5 219 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 CACNA1HO95180 2353 aa12.37□□□□□ -0.43
RFC4-208ENST00000447345 TBC1D3BA6NDS4 549 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 K7EQS6 105 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 TBL1XO60907 577 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 PENKP01210 267 aaPredicted RBP12.36□□□□□ -0.43
RFC4-208ENST00000447345 SERPING1P05155 500 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 TPM1P09493 284 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 ABCB4P21439 1286 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 HOXD9P28356 352 aaPredicted RBP12.36□□□□□ -0.43
RFC4-208ENST00000447345 HOXC13P31276 330 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 SDC4P31431 198 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 CCR1P32246 355 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 TIE1P35590 1138 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 GRIA2P42262 883 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 PTPN5P54829 565 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 CSTF1Q05048 431 aaKnown RBP12.36□□□□□ -0.43
RFC4-208ENST00000447345 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
RFC4-208ENST00000447345 TRIM14Q14142 442 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 C15orf59Q2T9L4 293 aaPredicted RBP12.36□□□□□ -0.43
RFC4-208ENST00000447345 SLC25A52Q3SY17 297 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 RAB6CQ53S08 254 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 SARM1Q6SZW1 724 aa12.36□□□□□ -0.43
RFC4-208ENST00000447345 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms