RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 MAGEB5Q9BZ81 275 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 PLA2G2FQ9BZM2 168 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 TKTL2Q9H0I9 626 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 ZWILCHQ9H900 591 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 TRPV4Q9HBA0 871 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 EPS15L1Q9UBC2 864 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 LCMT1Q9UIC8 334 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 USP18Q9UMW8 372 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 SH3BP1Q9Y3L3 701 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 ZFP37Q9Y6Q3 630 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 HEPACAM2A8MVW5 462 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 KCNU1A8MYU2 1149 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 PRPSAP2O60256 369 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 GREM1O60565 184 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 APOEP02649 317 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 PCK1P35558 622 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 GGCXP38435 758 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 SMTNL2Q2TAL5 461 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 PUS10Q3MIT2 529 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 BRMS1LQ5PSV4 323 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 NUGGCQ68CJ6 796 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 CYP4V2Q6ZWL3 525 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 SLFN11Q7Z7L1 901 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 DDX42Q86XP3 938 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 ATP6V0D2Q8N8Y2 350 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 FGF14Q92915 247 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 CALR3Q96L12 384 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 KIF9Q9HAQ2 790 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 ZFP14Q9HCL3 533 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 KCND1Q9NSA2 647 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 ARHGEF38Q9NXL2 777 aa18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 LSM7Q9UK45 103 aaKnown RBP18.67■□□□□ 0.58
TRAPPC4-203ENST00000447216 GOLGA6L7A0A1B0GV03 622 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 GOLGA6L9A6NEM1 432 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 ADRA1BP35368 520 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 HARS2P49590 506 aaKnown RBP18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 SLC25A11Q02978 314 aaKnown RBP18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 VITQ6UXI7 678 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 Q6ZNB5 142 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 UNC45BQ8IWX7 931 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 RSAD2Q8WXG1 361 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 RPP25Q9BUL9 199 aaKnown RBP18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 SNRNP25Q9BV90 132 aaKnown RBP18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 AGO1Q9UL18 857 aaKnown RBP18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 FZD10Q9ULW2 581 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 FAM50BQ9Y247 325 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 NR2E1Q9Y466 385 aa18.66■□□□□ 0.58
TRAPPC4-203ENST00000447216 ACSL4O60488 711 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 PAGE1O75459 146 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 SLC2A3P11169 496 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 TCF3P15923 654 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 SLC1A1P43005 524 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 HTR4Q13639 388 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 GRM2Q14416 872 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 CA9Q16790 459 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 HADHQ16836 314 aaKnown RBP18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 ATP13A4Q4VNC1 1196 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 KCNT1Q5JUK3 1230 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 ZNF569Q5MCW4 686 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 PIK3R6Q5UE93 754 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 NADSYN1Q6IA69 706 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 HTR3DQ70Z44 454 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 NT5DC3Q86UY8 548 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 BBS7Q8IWZ6 715 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 SYCE1Q8N0S2 351 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 PYROXD2Q8N2H3 581 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 BPIFB1Q8TDL5 484 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 HSPH1Q92598 858 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 BTN2A3PQ96KV6 586 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 ALS2CR12Q96Q35 445 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 NCAPGQ9BPX3 1015 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 DCLK3Q9C098 648 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 SIK2Q9H0K1 926 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 KLHL11Q9NVR0 708 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 SLC12A6Q9UHW9 1150 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 AMFRQ9UKV5 643 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 PACSIN2Q9UNF0 486 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 WNT6Q9Y6F9 365 aa18.65■□□□□ 0.58
TRAPPC4-203ENST00000447216 MIA3Q5JRA6 1907 aa18.64■□□□□ 0.58
TRAPPC4-203ENST00000447216 TICRRQ7Z2Z1 1910 aa18.64■□□□□ 0.58
TRAPPC4-203ENST00000447216 E2F8A0AVK6 867 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 TRDMT1O14717 391 aaKnown RBP18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 MARCKSL1P49006 195 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 VCPP55072 806 aaKnown RBP18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 ARL13BQ3SXY8 428 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 MTSS1LQ765P7 747 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 PEX26Q7Z412 305 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 SLC35F6Q8N357 371 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 KRT35Q92764 455 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 CD101Q93033 1021 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 NTAN1Q96AB6 310 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 ELSPBP1Q96BH3 223 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 LINC00597Q9H2U6 94 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 OBP2AQ9NY56 170 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 LIMD1Q9UGP4 676 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 AP4E1Q9UPM8 1137 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 HS3ST4Q9Y661 456 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 NUMBLQ9Y6R0 609 aa18.64■□□□□ 0.57
TRAPPC4-203ENST00000447216 ANHXE9PGG2 379 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms