RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 MCL1Q07820 350 aa11.64□□□□□ -0.55
PTCH2-203ENST00000447098 ALKBH8Q96BT7 664 aaKnown RBP11.64□□□□□ -0.55
PTCH2-203ENST00000447098 PAFAH2Q99487 392 aa11.64□□□□□ -0.55
PTCH2-203ENST00000447098 NDNQ99608 321 aa11.64□□□□□ -0.55
PTCH2-203ENST00000447098 MRPL45Q9BRJ2 306 aaKnown RBP11.64□□□□□ -0.55
PTCH2-203ENST00000447098 GPR88Q9GZN0 384 aa11.64□□□□□ -0.55
PTCH2-203ENST00000447098 SMIM28A0A1B0GU29 152 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 BGNP21810 368 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CCND3P30281 292 aaPredicted RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SSTR1P30872 391 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 GRB14Q14449 540 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 MFSD7Q6UXD7 560 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 PCGF5Q86SE9 256 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SPATA24Q86W54 205 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 TRIM42Q8IWZ5 723 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 C12orf56Q8IXR9 622 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ATP2A3Q93084 1043 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ZIC5Q96T25 663 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 COLEC11Q9BWP8 271 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 FSD1LQ9BXM9 530 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 C12orf65Q9H3J6 166 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 PPCSQ9HAB8 311 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 APOBEC3GQ9HC16 384 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CHCHD3Q9NX63 227 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SMIM35A0A1B0GVV1 85 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ETS1P14921 441 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ACADSBP45954 432 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 RABGGTBP53611 331 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CDK16Q00536 496 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 OTUD4Q01804 1114 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 OCRLQ01968 901 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 EFEMP1Q12805 493 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 TMED1Q13445 227 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 FASTKD3Q14CZ7 662 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SLC10A6Q3KNW5 377 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ATG16L1Q676U5 607 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CRLF3Q8IUI8 442 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 MCUQ8NE86 351 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ACTL9Q8TC94 416 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ZFAND2BQ8WV99 257 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SKA2Q8WVK7 121 aaPredicted RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 NTPCRQ9BSD7 190 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 B3GNT5Q9BYG0 378 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CDHR5Q9HBB8 845 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 STX18Q9P2W9 335 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 DNPEPQ9ULA0 475 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 C4BPAP04003 597 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 PYGLP06737 847 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 USP17L7P0C7H9 530 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 BST2Q10589 180 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 BTG3Q14201 252 aaPredicted RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 NFIL3Q16649 462 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 TSHZ1Q6ZSZ6 1077 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 GPR152Q8TDT2 470 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ZNF516Q92618 1163 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 NMD3Q96D46 503 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SP110Q9HB58 689 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 WASF2Q9Y6W5 498 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 BANF1O75531 89 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 C1QBPQ07021 282 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ASPHQ12797 758 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 MOGSQ13724 837 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 MMEL1Q495T6 779 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SLC39A12Q504Y0 691 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 PRPF39Q86UA1 669 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CHSY1Q86X52 802 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ARID3BQ8IVW6 561 aaPredicted RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ZNF398Q8TD17 642 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 NDRG1Q92597 394 aaKnown RBP11.63□□□□□ -0.55
PTCH2-203ENST00000447098 LPIN3Q9BQK8 851 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CNPY3Q9BT09 278 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SLC13A1Q9BZW2 595 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 ST6GALNAC4Q9H4F1 302 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CYP4F11Q9HBI6 524 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 SMPD4Q9NXE4 827 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 CHMP2BQ9UQN3 213 aa11.63□□□□□ -0.55
PTCH2-203ENST00000447098 AXLP30530 894 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 ETFBP38117 255 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 PTK7Q13308 1070 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 HIC1Q14526 733 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 PCSK7Q16549 785 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 DNAL1Q4LDG9 190 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 RHBDF2Q6PJF5 856 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 TMC7Q7Z402 723 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 SDCCAG8Q86SQ7 713 aaPredicted RBP11.62□□□□□ -0.55
PTCH2-203ENST00000447098 FBXO32Q969P5 355 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 BORCS6Q96GS4 357 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 OXNAD1Q96HP4 312 aaPredicted RBP11.62□□□□□ -0.55
PTCH2-203ENST00000447098 SLITRK1Q96PX8 696 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 WWP1Q9H0M0 922 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 WDCPQ9H6R7 721 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 C2orf71A6NGG8 1288 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 LYNP07948 512 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 PPP1R26Q5T8A7 1209 aaPredicted RBP11.62□□□□□ -0.55
PTCH2-203ENST00000447098 DEFB106AQ8N104 65 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 TMEM130Q8N3G9 435 aa11.62□□□□□ -0.55
PTCH2-203ENST00000447098 DPF3Q92784 378 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms