RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 INTS8Q75QN2 995 aaKnown RBP25.52■■□□□ 1.68
PMS1-214ENST00000446877 LHX5Q9H2C1 402 aa25.52■■□□□ 1.68
PMS1-214ENST00000446877 CLEC4EQ9ULY5 219 aa25.52■■□□□ 1.68
PMS1-214ENST00000446877 PLA2G4CQ9UP65 541 aa25.52■■□□□ 1.68
PMS1-214ENST00000446877 MAPK13O15264 365 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 MPPE1Q53F39 396 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 GALNT15Q8N3T1 639 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 TTC39CQ8N584 583 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 C1orf216Q8TAB5 229 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 BAHD1Q8TBE0 780 aaPredicted RBP25.51■■□□□ 1.67
PMS1-214ENST00000446877 UBXN6Q9BZV1 441 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 MMRN2Q9H8L6 949 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 ACACAQ13085 2346 aa25.51■■□□□ 1.67
PMS1-214ENST00000446877 TRIM49P0CI25 452 aa25.5■■□□□ 1.67
PMS1-214ENST00000446877 TRIM49CP0CI26 452 aa25.5■■□□□ 1.67
PMS1-214ENST00000446877 YWHAGP61981 247 aaKnown RBP eCLIP25.5■■□□□ 1.67
PMS1-214ENST00000446877 KIF19Q2TAC6 998 aa25.5■■□□□ 1.67
PMS1-214ENST00000446877 FNDC3BQ53EP0 1204 aaKnown RBP25.5■■□□□ 1.67
PMS1-214ENST00000446877 ENGASEQ8NFI3 743 aa25.5■■□□□ 1.67
PMS1-214ENST00000446877 PLD4Q96BZ4 506 aa25.5■■□□□ 1.67
PMS1-214ENST00000446877 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.5■■□□□ 1.67
PMS1-214ENST00000446877 TRAF3IP3Q9Y228 551 aa25.5■■□□□ 1.67
PMS1-214ENST00000446877 LOC400499M0QZD8 3231 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 HLA-EP13747 358 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 HARS2P49590 506 aaKnown RBP25.49■■□□□ 1.67
PMS1-214ENST00000446877 PPP3CAQ08209 521 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 CAMK2GQ13555 558 aaPredicted RBP25.49■■□□□ 1.67
PMS1-214ENST00000446877 TMEM215Q68D42 235 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 PIGZQ86VD9 579 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 RBBP8NLQ8NC74 664 aaPredicted RBP25.49■■□□□ 1.67
PMS1-214ENST00000446877 ARID3AQ99856 593 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 C6orf106Q9H6K1 298 aaPredicted RBP25.49■■□□□ 1.67
PMS1-214ENST00000446877 SCUBE2Q9NQ36 999 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 TOR4AQ9NXH8 423 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 DKK4Q9UBT3 224 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 CFAP45Q9UL16 551 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.49■■□□□ 1.67
PMS1-214ENST00000446877 SNX11Q9Y5W9 270 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 APC2O95996 2303 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 MYH10P35580 1976 aa25.49■■□□□ 1.67
PMS1-214ENST00000446877 EIF4E1BA6NMX2 242 aaKnown RBP25.48■■□□□ 1.67
PMS1-214ENST00000446877 ACTN4O43707 911 aaKnown RBP25.48■■□□□ 1.67
PMS1-214ENST00000446877 NR2F2P24468 414 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 ACSL1P33121 698 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 GRK6P43250 576 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 ATL3Q6DD88 541 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 FAM186BQ8IYM0 893 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 WFIKKN2Q8TEU8 576 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 CCDC47Q96A33 483 aaKnown RBP25.48■■□□□ 1.67
PMS1-214ENST00000446877 TMEM176AQ96HP8 235 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 LRIG1Q96JA1 1093 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 OSGEPQ9NPF4 335 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 ANKRD6Q9Y2G4 727 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 CELSR3Q9NYQ7 3312 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 IGSF10Q6WRI0 2623 aa25.48■■□□□ 1.67
PMS1-214ENST00000446877 ADAMTS20P59510 1910 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 TNFSF14O43557 240 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 TSPAN3O60637 253 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 ZBED1O96006 694 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 MYL1P05976 194 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 ZSCAN22P10073 491 aaPredicted RBP25.47■■□□□ 1.67
PMS1-214ENST00000446877 RPL13P26373 211 aaKnown RBP25.47■■□□□ 1.67
PMS1-214ENST00000446877 TKTL1P51854 596 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 ENPEPQ07075 957 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 FAM217AQ8IXS0 508 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 RNF139Q8WU17 664 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 CYB5D2Q8WUJ1 264 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 BTBD1Q9H0C5 482 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 FBRSQ9HAH7 460 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 TMEM8AQ9HCN3 771 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 TM9SF3Q9HD45 589 aa25.47■■□□□ 1.67
PMS1-214ENST00000446877 OLA1Q9NTK5 396 aaKnown RBP25.47■■□□□ 1.67
PMS1-214ENST00000446877 SMG1Q96Q15 3661 aaKnown RBP25.47■■□□□ 1.67
PMS1-214ENST00000446877 TRABD2BA6NFA1 517 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 DKK1O94907 266 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 SEMA4FO95754 770 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 DNTTP04053 509 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 PSMC2P35998 433 aaKnown RBP25.46■■□□□ 1.67
PMS1-214ENST00000446877 GRIA4P48058 902 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 ZNF445P59923 1031 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 ZBTB16Q05516 673 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 CYP4F3Q08477 520 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 TRIP4Q15650 581 aaPredicted RBP25.46■■□□□ 1.67
PMS1-214ENST00000446877 CCDC157Q569K6 752 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 RAB41Q5JT25 222 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 ANKRD52Q8NB46 1076 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 TMA16Q96EY4 203 aaKnown RBP25.46■■□□□ 1.67
PMS1-214ENST00000446877 FAXDC2Q96IV6 333 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 TMEM245Q9H330 911 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 CISHQ9NSE2 258 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 USP25Q9UHP3 1055 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 BTBD3Q9Y2F9 522 aa25.46■■□□□ 1.67
PMS1-214ENST00000446877 FSBPO95073 299 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 HOXD9P28356 352 aaPredicted RBP25.45■■□□□ 1.66
PMS1-214ENST00000446877 HLA-FP30511 346 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 GTF2H1P32780 548 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 PDE4CQ08493 712 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 INAVAQ3KP66 663 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 ARHGAP17Q68EM7 881 aa25.45■■□□□ 1.66
PMS1-214ENST00000446877 KRT39Q6A163 491 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms