RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 CLEC9AQ6UXN8 241 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 KRBA2Q6ZNG9 492 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 SYT13Q7L8C5 426 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 DTX2Q86UW9 622 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 PRIMA1Q86XR5 153 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 FSTL5Q8N475 847 aaPredicted RBP5.32□□□□□ -1.56
LINC00440-201ENST00000446579 TCP11L2Q8N4U5 519 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 METTL25Q8N6Q8 603 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 CCDC89Q8N998 374 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 HMGB4Q8WW32 186 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 ATRIPQ8WXE1 791 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 TMEM125Q96AQ2 219 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 Q96MF0 132 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 MECRQ9BV79 373 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 PRDM13Q9H4Q3 707 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 OLA1Q9NTK5 396 aaKnown RBP5.32□□□□□ -1.56
LINC00440-201ENST00000446579 CLIC5Q9NZA1 410 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 DRG1Q9Y295 367 aaKnown RBP5.32□□□□□ -1.56
LINC00440-201ENST00000446579 RABGAP1Q9Y3P9 1069 aa5.32□□□□□ -1.56
LINC00440-201ENST00000446579 GATA3P23771 443 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 CD38P28907 300 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 PSMC2P35998 433 aaKnown RBP5.31□□□□□ -1.56
LINC00440-201ENST00000446579 PBX1P40424 430 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 RBM5P52756 815 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC00440-201ENST00000446579 CASP6P55212 293 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 C21orf58P58505 322 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 KCNJ12Q14500 433 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 TMEM196Q5HYL7 178 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 WDR45BQ5MNZ6 344 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 DEPDC1Q5TB30 811 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 SLC9A4Q6AI14 798 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 C16orf54Q6UWD8 224 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 ADAMTS15Q8TE58 950 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 SLC22A17Q8WUG5 538 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 SOCS4Q8WXH5 440 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 ZUFSPQ96AP4 578 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 PTCD3Q96EY7 689 aaKnown RBP5.31□□□□□ -1.56
LINC00440-201ENST00000446579 MCRS1Q96EZ8 462 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 NAF1Q96HR8 494 aaKnown RBP5.31□□□□□ -1.56
LINC00440-201ENST00000446579 BBC3Q96PG8 261 aaPredicted RBP5.31□□□□□ -1.56
LINC00440-201ENST00000446579 INTS13Q9NVM9 706 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 IRAK4Q9NWZ3 460 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 AASSQ9UDR5 926 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 CYP46A1Q9Y6A2 500 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 LMTK3Q96Q04 1460 aa5.31□□□□□ -1.56
LINC00440-201ENST00000446579 TRGV11A0A075B6L2 103 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 DYTNA2CJ06 578 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 A6NCN8 305 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 PGPEP1LA6NFU8 196 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 A8MVJ9 347 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 STX16-NPEPL1H3BU86 382 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 STX16O14662 325 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 USO1O60763 962 aaKnown RBP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 MPLP40238 635 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 MTHFSP49914 203 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 DGKQP52824 942 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 EIF4A1P60842 406 aaKnown RBP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 SP2Q02086 613 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 FOXI1Q12951 378 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 ST3GAL2Q16842 350 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 AASDHQ4L235 1098 aaPredicted RBP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 ZNF484Q5JVG2 852 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 TTLL5Q6EMB2 1281 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 CCDC144NLQ6NUI1 221 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 Q6ZNX1 250 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 FASTKD5Q7L8L6 764 aaKnown RBP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 RAB11FIP4Q86YS3 637 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 LNX2Q8N448 690 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 SLC44A3Q8N4M1 653 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 ZMIZ2Q8NF64 920 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 TDRD7Q8NHU6 1098 aaKnown RBP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 NTN5Q8WTR8 489 aaPredicted RBP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 SERINC2Q96SA4 455 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 CHCHD6Q9BRQ6 235 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 WDR26Q9H7D7 661 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 SYNPO2LQ9H987 977 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 PLEKHA5Q9HAU0 1116 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 ARHGAP26Q9UNA1 814 aa5.3□□□□□ -1.56
LINC00440-201ENST00000446579 UBE2J1Q9Y385 318 aaPredicted RBP5.3□□□□□ -1.56
LINC00440-201ENST00000446579 SPATA31A6Q5VVP1 1343 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 ANKRD18BA2A2Z9 1011 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 MBD3L5A6NJ08 208 aaPredicted RBP5.29□□□□□ -1.56
LINC00440-201ENST00000446579 EXOC5O00471 708 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 PPM1DO15297 605 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 SEPT4O43236 478 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 HEXIM1O94992 359 aaKnown RBP5.29□□□□□ -1.56
LINC00440-201ENST00000446579 RTN3O95197 1032 aaPredicted RBP5.29□□□□□ -1.56
LINC00440-201ENST00000446579 CSF1P09603 554 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 ZNF37AP17032 561 aaPredicted RBP5.29□□□□□ -1.56
LINC00440-201ENST00000446579 GSTM5P46439 218 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 CCT4P50991 539 aaKnown RBP5.29□□□□□ -1.56
LINC00440-201ENST00000446579 LY6KQ17RY6 165 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 AAK1Q2M2I8 961 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 CCDC30Q5VVM6 783 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 RD3Q7Z3Z2 195 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 C11orf44Q8N8P7 122 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 UCMAQ8WVF2 138 aa5.29□□□□□ -1.56
LINC00440-201ENST00000446579 CTHRC1Q96CG8 243 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms