RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 STAP1Q9ULZ2 295 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 TEX264Q9Y6I9 313 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 ZNF638Q14966 1978 aaKnown RBP17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 MT-ND3P03897 115 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 FYNP06241 537 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 SCTRP47872 440 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 IRX4P78413 519 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 SREBF2Q12772 1141 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 CGB2Q6NT52 195 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 TFB1MQ8WVM0 346 aaKnown RBP17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 HTR3CQ8WXA8 447 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 TTC17Q96AE7 1141 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 SERAC1Q96JX3 654 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 SLC13A1Q9BZW2 595 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 PRDM12Q9H4Q4 367 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 POPDC2Q9HBU9 364 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 PRG3Q9Y2Y8 225 aaPredicted RBP17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 Q9Y3F1 56 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 USP15Q9Y4E8 981 aaPredicted RBP17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 SEPT4O43236 478 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 SRGAP2BP0DMP2 458 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 PYGBP11216 843 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 KLHL38Q2WGJ6 581 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 RIBC1Q8N443 379 aaPredicted RBP17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 CCT6BQ92526 530 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 CELF6Q96J87 481 aaKnown RBP17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 E7ESA3 106 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 RNF103O00237 685 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 GPR182O15218 404 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 CA12O43570 354 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 TOP3BO95985 862 aaKnown RBP17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 HOXC8P31273 242 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 NOS2P35228 1153 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 TRPM8Q7Z2W7 1104 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 LRRC8CQ8TDW0 803 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 APOL2Q9BQE5 337 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 ZMYND8Q9ULU4 1186 aaPredicted RBP17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 CCDC189A1A4V9 331 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 BCLAF3A2AJT9 711 aaKnown RBP17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 GABRDO14764 452 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 CHADO15335 359 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 DAB1O75553 588 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 UBOX5O94941 541 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 ASMTLO95671 621 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 PSMB4P28070 264 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 ANKRD20A2Q5SQ80 823 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 ANKRD20A1Q5TYW2 823 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 ANKRD20A3Q5VUR7 823 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 KIRREL3Q8IZU9 778 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 COLGALT1Q8NBJ5 622 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 MAGEB18Q96M61 343 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 DNAI2Q9GZS0 605 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 SMYD2Q9NRG4 433 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 UBP1Q9NZI7 540 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 SLC24A2Q9UI40 661 aa17.36■□□□□ 0.37
LAPTM4B-201ENST00000445593 WDR27A2RRH5 827 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 TRIM49D1C9J1S8 452 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 DAOAP59103 153 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 LPIN1Q14693 890 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 MROH9Q5TGP6 573 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 STRADAQ7RTN6 431 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 P2RY11Q96G91 374 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 FAM111AQ96PZ2 611 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 PDE4DIPQ5VU43 2346 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 RALGAPA2Q2PPJ7 1873 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 SARNPP82979 210 aaKnown RBP17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 ACTN3Q08043 901 aaPredicted RBP17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 UPP1Q16831 310 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 LRRTM3Q86VH5 581 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 SCN4BQ8IWT1 228 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 KIF2BQ8N4N8 673 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 USP33Q8TEY7 942 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 NPY6RQ99463 290 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 FAM124BQ9H5Z6 455 aaPredicted RBP17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 CCDC134Q9H6E4 229 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 DCTN4Q9UJW0 460 aa17.35■□□□□ 0.37
LAPTM4B-201ENST00000445593 ADAMTS4O75173 837 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 SUN1O94901 812 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 PPP2R5DQ14738 602 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 RWDD4Q6NW29 188 aaKnown RBP17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 UNC5AQ6ZN44 842 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 PID1Q7Z2X4 250 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 OR10T2Q8NGX3 314 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 CCDC195A0A1B0GUA6 201 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 LPXNO60711 386 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 LTFP02788 710 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 ERCC2P18074 760 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 TPI1P60174 286 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 ADGRD1Q6QNK2 874 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 RFX8Q6ZV50 586 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 PGBD4Q96DM1 585 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 ATXN7L3BQ96GX2 97 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 QKIQ96PU8 341 aaKnown RBP eCLIP17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 RTP3Q9BQQ7 232 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 PHTF1Q9UMS5 762 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 TRIM33Q9UPN9 1127 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 H3BRJ5 948 aa17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 MSI1O43347 362 aaKnown RBP17.34■□□□□ 0.37
LAPTM4B-201ENST00000445593 B4GALT3O60512 393 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms