RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 HACE1Q8IYU2 909 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 RNF139Q8WU17 664 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 KCTD13Q8WZ19 329 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 LGMNQ99538 433 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 SF3B1O75533 1304 aaKnown RBP eCLIP18.4■□□□□ 0.54
CLDN9-201ENST00000445369 HMX2A2RU54 273 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 TRAFD1O14545 582 aaPredicted RBP18.4■□□□□ 0.54
CLDN9-201ENST00000445369 KRT38O76015 456 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 CBX6O95503 412 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 MYL3P08590 195 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 MLNP12872 115 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 EZRP15311 586 aaKnown RBP18.4■□□□□ 0.54
CLDN9-201ENST00000445369 CPT1AP50416 773 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 SLC8A3P57103 927 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 CDK16Q00536 496 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 BMPR2Q13873 1038 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 STEAP4Q687X5 459 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 MTDHQ86UE4 582 aaKnown RBP18.4■□□□□ 0.54
CLDN9-201ENST00000445369 OXNAD1Q96HP4 312 aaPredicted RBP18.4■□□□□ 0.54
CLDN9-201ENST00000445369 PPP1R10Q96QC0 940 aaKnown RBP18.4■□□□□ 0.54
CLDN9-201ENST00000445369 KCNK13Q9HB14 408 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 SAR1AQ9NR31 198 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 EIF2B3Q9NR50 452 aaKnown RBP18.4■□□□□ 0.54
CLDN9-201ENST00000445369 MOCS1Q9NZB8 636 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 CPA4Q9UI42 421 aa18.4■□□□□ 0.54
CLDN9-201ENST00000445369 GABRDO14764 452 aa18.39■□□□□ 0.53
CLDN9-201ENST00000445369 PTPN1P18031 435 aaKnown RBP18.39■□□□□ 0.53
CLDN9-201ENST00000445369 ACAT1P24752 427 aaKnown RBP18.39■□□□□ 0.53
CLDN9-201ENST00000445369 HOXC8P31273 242 aa18.39■□□□□ 0.53
CLDN9-201ENST00000445369 ZNF449Q6P9G9 518 aa18.39■□□□□ 0.53
CLDN9-201ENST00000445369 CLEC20AQ6ZU45 233 aa18.39■□□□□ 0.53
CLDN9-201ENST00000445369 CYS1Q717R9 158 aa18.39■□□□□ 0.53
CLDN9-201ENST00000445369 SLC2A13Q96QE2 648 aa18.39■□□□□ 0.53
CLDN9-201ENST00000445369 TMPRSS4Q9NRS4 437 aa18.39■□□□□ 0.53
CLDN9-201ENST00000445369 A0A0G2JND7 137 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 C17orf102A2RUQ5 167 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 H3BRJ5 948 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 CYB561D2O14569 222 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 WFS1O76024 890 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 DLDP09622 509 aaKnown RBP18.38■□□□□ 0.53
CLDN9-201ENST00000445369 FAM163BP0C2L3 166 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 GLUD2P49448 558 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 SERPINB9P50453 376 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 SARNPP82979 210 aaKnown RBP18.38■□□□□ 0.53
CLDN9-201ENST00000445369 BEX3Q00994 111 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 WSCD1Q658N2 575 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 CCDC91Q7Z6B0 441 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 NME8Q8N427 588 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 STAMBPL1Q96FJ0 436 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 TRPM7Q96QT4 1865 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 LNPEPQ9UIQ6 1025 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 STAP1Q9ULZ2 295 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 OPHN1O60890 802 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 ALDH1A2O94788 518 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 NEFHP12036 1026 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 CCND1P24385 295 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 NDUFV1P49821 464 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 RASSF2P50749 326 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 ARFIP2P53365 341 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 KIAA0319Q5VV43 1072 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 TWF2Q6IBS0 349 aaKnown RBP18.38■□□□□ 0.53
CLDN9-201ENST00000445369 COLGALT1Q8NBJ5 622 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 DEPDC1BQ8WUY9 529 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 SKA1Q96BD8 255 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 KATNAL1Q9BW62 490 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 TMEM120AQ9BXJ8 343 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 EBF2Q9HAK2 575 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 LRRC4Q9HBW1 653 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.38■□□□□ 0.53
CLDN9-201ENST00000445369 L3MBTL1Q9Y468 752 aa18.38■□□□□ 0.53
CLDN9-201ENST00000445369 M0QYT0 321 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 RNF103O00237 685 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 DNAJC6O75061 913 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 DPYSQ14117 519 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 PAFAH1B3Q15102 231 aaKnown RBP18.37■□□□□ 0.53
CLDN9-201ENST00000445369 CCL14Q16627 93 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 MDH1BQ5I0G3 518 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 SYPL2Q5VXT5 272 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 LRRC8BQ6P9F7 803 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 TIFABQ6ZNK6 161 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 WNT8BQ93098 351 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 P2RY11Q96G91 374 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 ZFP42Q96MM3 310 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 MTO1Q9Y2Z2 717 aaKnown RBP18.37■□□□□ 0.53
CLDN9-201ENST00000445369 WDR27A2RRH5 827 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 F5H423 210 aaPredicted RBP18.37■□□□□ 0.53
CLDN9-201ENST00000445369 HNRNPCL1O60812 293 aaKnown RBP18.37■□□□□ 0.53
CLDN9-201ENST00000445369 IGFBP6P24592 240 aaPredicted RBP18.37■□□□□ 0.53
CLDN9-201ENST00000445369 AP1B1Q10567 949 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 HFE2Q6ZVN8 426 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 MARK2Q7KZI7 788 aaKnown RBP18.37■□□□□ 0.53
CLDN9-201ENST00000445369 TRIM42Q8IWZ5 723 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 SIX6OS1Q8N1H7 587 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 PDCD7Q8N8D1 485 aaKnown RBP18.37■□□□□ 0.53
CLDN9-201ENST00000445369 ARMC2Q8NEN0 867 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 MECRQ9BV79 373 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 TBC1D10AQ9BXI6 508 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 PIGVQ9NUD9 493 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 PCMTD2Q9NV79 361 aa18.37■□□□□ 0.53
CLDN9-201ENST00000445369 SIRPGQ9P1W8 387 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms