RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 NLRC4Q9NPP4 1024 aa19.38■□□□□ 0.69
CCDC188-202ENST00000444532 MYO18AQ92614 2054 aaKnown RBP19.37■□□□□ 0.69
CCDC188-202ENST00000444532 PRRT4C9JH25 899 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 SGK1O00141 431 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 EPHB6O15197 1021 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 GFPT2O94808 682 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 TRUB2O95900 331 aaKnown RBP19.37■□□□□ 0.69
CCDC188-202ENST00000444532 IGLV3-25P01717 112 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 NTSR1P30989 418 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 STAT1P42224 750 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 GABRB2P47870 512 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 CDK17Q00537 523 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 E2F5Q15329 346 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 DCAF6Q58WW2 860 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 MPP7Q5T2T1 576 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 TAF3Q5VWG9 929 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 OLFML1Q6UWY5 402 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 FAM183BPQ6ZVS7 135 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 SLC26A9Q7LBE3 791 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 TAC4Q86UU9 113 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 ZNF397Q8NF99 534 aaPredicted RBP19.37■□□□□ 0.69
CCDC188-202ENST00000444532 ADAM32Q8TC27 787 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 GAB3Q8WWW8 586 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 PIWIL1Q96J94 861 aaKnown RBP19.37■□□□□ 0.69
CCDC188-202ENST00000444532 SLC2A13Q96QE2 648 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 POLMQ9NP87 494 aaPredicted RBP19.37■□□□□ 0.69
CCDC188-202ENST00000444532 EML5Q05BV3 1969 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 WDR87Q6ZQQ6 2873 aa19.37■□□□□ 0.69
CCDC188-202ENST00000444532 SYCE3A1L190 88 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 TSPAN3O60637 253 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 ADAM23O75077 832 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 ALDH1A2O94788 518 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 HNRNPLP14866 589 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCDC188-202ENST00000444532 HOXD9P28356 352 aaPredicted RBP19.36■□□□□ 0.69
CCDC188-202ENST00000444532 GBP1P32455 592 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 FAM133BQ5BKY9 247 aaKnown RBP19.36■□□□□ 0.69
CCDC188-202ENST00000444532 PIK3R6Q5UE93 754 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 LAIR1Q6GTX8 287 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 SDE2Q6IQ49 451 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 TMEM92Q6UXU6 159 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 PRR23BQ6ZRT6 265 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 RASSF3Q86WH2 238 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 ERICH1Q86X53 443 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 DEFB106AQ8N104 65 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 MSANTD4Q8NCY6 345 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 C18orf8Q96DM3 657 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCDC188-202ENST00000444532 NCDNQ9UBB6 729 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 NOCTQ9UK39 431 aaKnown RBP19.36■□□□□ 0.69
CCDC188-202ENST00000444532 HCN2Q9UL51 889 aa19.36■□□□□ 0.69
CCDC188-202ENST00000444532 RIF1Q5UIP0 2472 aaKnown RBP19.35■□□□□ 0.69
CCDC188-202ENST00000444532 NPC1O15118 1278 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 RPP40O75818 363 aaKnown RBP19.35■□□□□ 0.69
CCDC188-202ENST00000444532 APOEP02649 317 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 MMEP08473 750 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 SLC2A3P11169 496 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 SCNN1AP37088 669 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 CDR2Q01850 454 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 SRSF5Q13243 272 aaKnown RBP19.35■□□□□ 0.69
CCDC188-202ENST00000444532 EIF4EBP2Q13542 120 aaPredicted RBP19.35■□□□□ 0.69
CCDC188-202ENST00000444532 IQCB1Q15051 598 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 SKOR2Q2VWA4 1001 aaPredicted RBP19.35■□□□□ 0.69
CCDC188-202ENST00000444532 FILIP1LQ4L180 1135 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 EGFLAMQ63HQ2 1017 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 CEP68Q76N32 757 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 ANKS1BQ7Z6G8 1248 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 BTN2A3PQ96KV6 586 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 HINFPQ9BQA5 517 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 RTN4Q9NQC3 1192 aaKnown RBP19.35■□□□□ 0.69
CCDC188-202ENST00000444532 RRN3Q9NYV6 651 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 DMDP11532 3685 aa19.35■□□□□ 0.69
CCDC188-202ENST00000444532 GOLGA6L7A0A1B0GV03 622 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 TIMM44O43615 452 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 DAB1O75553 588 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 GRAP2O75791 330 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 CAVIN2O95810 425 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 SLC6A4P31645 630 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 NOS2P35228 1153 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 NOMO3P69849 1222 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 EIF4HQ15056 248 aaKnown RBP19.34■□□□□ 0.69
CCDC188-202ENST00000444532 GEN1Q17RS7 908 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 ZC3H12AQ5D1E8 599 aaKnown RBP19.34■□□□□ 0.69
CCDC188-202ENST00000444532 NADSYN1Q6IA69 706 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 RFWD3Q6PCD5 774 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 CACNA2D4Q7Z3S7 1137 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 CHPFQ8IZ52 775 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 ZNF557Q8N988 423 aaPredicted RBP19.34■□□□□ 0.69
CCDC188-202ENST00000444532 UCMAQ8WVF2 138 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 ZDHHC4Q9NPG8 344 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 SLC12A6Q9UHW9 1150 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 GMEB2Q9UKD1 530 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 CLEC4EQ9ULY5 219 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 FAM186AA6NE01 2351 aa19.34■□□□□ 0.69
CCDC188-202ENST00000444532 ZNF292O60281 2723 aa19.33■□□□□ 0.69
CCDC188-202ENST00000444532 TEX33O43247 280 aa19.33■□□□□ 0.68
CCDC188-202ENST00000444532 MATKP42679 507 aa19.33■□□□□ 0.68
CCDC188-202ENST00000444532 PITX1P78337 314 aaPredicted RBP19.33■□□□□ 0.68
CCDC188-202ENST00000444532 MTA1Q13330 715 aa19.33■□□□□ 0.68
CCDC188-202ENST00000444532 USP39Q53GS9 565 aaKnown RBP19.33■□□□□ 0.68
CCDC188-202ENST00000444532 RNF43Q68DV7 783 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms