RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 HHIPQ96QV1 700 aa22.73■■□□□ 1.23
TRAF4-205ENST00000444415 SPAG5Q96R06 1193 aa22.73■■□□□ 1.23
TRAF4-205ENST00000444415 PCDHB18PQ96TA0 734 aa22.73■■□□□ 1.23
TRAF4-205ENST00000444415 SGK1O00141 431 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 TSPAN3O60637 253 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 LSM8O95777 96 aaKnown RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 TRUB2O95900 331 aaKnown RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 STAT1P42224 750 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 MRPS21P82921 87 aaKnown RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 SLC6A3Q01959 620 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 SRSF5Q13243 272 aaKnown RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 DCAF6Q58WW2 860 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 C10orf76Q5T2E6 689 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 ADGRF1Q5T601 910 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 HEATR6Q6AI08 1181 aaKnown RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 RFWD3Q6PCD5 774 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 TMEM92Q6UXU6 159 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 ZNF677Q86XU0 584 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 XYLT1Q86Y38 959 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 CCDC33Q8N5R6 958 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 ZNF397Q8NF99 534 aaPredicted RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 CPA5Q8WXQ8 436 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 PRICKLE1Q96MT3 831 aaPredicted RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 XPO6Q96QU8 1125 aaKnown RBP22.72■■□□□ 1.23
TRAF4-205ENST00000444415 MMP17Q9ULZ9 603 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 STARD13Q9Y3M8 1113 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 CEP83Q9Y592 693 aa22.72■■□□□ 1.23
TRAF4-205ENST00000444415 LAMA1P25391 3075 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 TBC1D3BA6NDS4 549 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 CAPN9O14815 690 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 GFRA3O60609 400 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 HSF2BPO75031 334 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 DGKGP49619 791 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 PPP2R5DQ14738 602 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 GEN1Q17RS7 908 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 NAA35Q5VZE5 725 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 NUGGCQ68CJ6 796 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 TRNP1Q6NT89 227 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 TXNDC5Q8NBS9 432 aaKnown RBP22.71■■□□□ 1.23
TRAF4-205ENST00000444415 IPO4Q8TEX9 1081 aaKnown RBP22.71■■□□□ 1.23
TRAF4-205ENST00000444415 ACDQ96AP0 544 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 SLC27A6Q9Y2P4 619 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 MUC22E2RYF6 1773 aaPredicted RBP22.71■■□□□ 1.23
TRAF4-205ENST00000444415 SDK1Q7Z5N4 2213 aa22.71■■□□□ 1.23
TRAF4-205ENST00000444415 HRO43593 1189 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 ACSL4O60488 711 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 DAB1O75553 588 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 TFE3P19532 575 aaPredicted RBP22.7■■□□□ 1.22
TRAF4-205ENST00000444415 NR1I3Q14994 352 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 EFHC1Q5JVL4 640 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 EGFLAMQ63HQ2 1017 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 E4F1Q66K89 784 aaPredicted RBP22.7■■□□□ 1.22
TRAF4-205ENST00000444415 WFDC5Q8TCV5 224 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 ATRIPQ8WXE1 791 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 AZIN2Q96A70 460 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 ACOX2Q99424 681 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 TRIM62Q9BVG3 475 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 TTYH3Q9C0H2 523 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 NUCKS1Q9H1E3 243 aaKnown RBP22.7■■□□□ 1.22
TRAF4-205ENST00000444415 EPC1Q9H2F5 836 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 PDCL3Q9H2J4 239 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 SLC8A2Q9UPR5 921 aa22.7■■□□□ 1.22
TRAF4-205ENST00000444415 KLF8O95600 359 aaPredicted RBP22.69■■□□□ 1.22
TRAF4-205ENST00000444415 UNGP13051 313 aaPredicted RBP22.69■■□□□ 1.22
TRAF4-205ENST00000444415 NRLP54845 237 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 CRY1Q16526 586 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 SKOR2Q2VWA4 1001 aaPredicted RBP22.69■■□□□ 1.22
TRAF4-205ENST00000444415 ZC3H12AQ5D1E8 599 aaKnown RBP22.69■■□□□ 1.22
TRAF4-205ENST00000444415 PIK3R6Q5UE93 754 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 TMEM215Q68D42 235 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 WDR5BQ86VZ2 330 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 LONP2Q86WA8 852 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 UNC45BQ8IWX7 931 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 C18orf8Q96DM3 657 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 SYT11Q9BT88 431 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 CD248Q9HCU0 757 aa22.69■■□□□ 1.22
TRAF4-205ENST00000444415 A0A1W2PQC6 194 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 LMNAP02545 664 aaKnown RBP22.68■■□□□ 1.22
TRAF4-205ENST00000444415 ARID5AQ03989 594 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 PTP4A2Q12974 167 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 ERICH1Q86X53 443 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 ZDHHC17Q8IUH5 632 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 ZNF513Q8N8E2 541 aaPredicted RBP22.68■■□□□ 1.22
TRAF4-205ENST00000444415 DDI1Q8WTU0 396 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 SEMA4AQ9H3S1 761 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 SYNCQ9H7C4 482 aa22.68■■□□□ 1.22
TRAF4-205ENST00000444415 I6L893 689 aaPredicted RBP22.67■■□□□ 1.22
TRAF4-205ENST00000444415 MMP8P22894 467 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 HLA-FP30511 346 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 FLT3P36888 993 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 SCNN1AP37088 669 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 PBX1P40424 430 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 FANCCQ00597 558 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 MPPE1Q53F39 396 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 IRF2BP2Q7Z5L9 587 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 CAMKK1Q8N5S9 505 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 CCDC26Q8TAB7 109 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 SLC30A5Q8TAD4 765 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 NT5C3BQ969T7 300 aa22.67■■□□□ 1.22
TRAF4-205ENST00000444415 NPY6RQ99463 290 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms