RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 LILRB4Q8NHJ6 448 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ATL1Q8WXF7 558 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TMCO6Q96DC7 493 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 NARS2Q96I59 477 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CEP170P1Q96L14 293 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CEP295NLQ96MC4 621 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF560Q96MR9 790 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RBBP8Q99708 897 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RTKNQ9BST9 563 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PLEKHA5Q9HAU0 1116 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 NEK6Q9HC98 313 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SSU72Q9NP77 194 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SLC9A2Q9UBY0 812 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 JAG2Q9Y219 1238 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ARHGEF28Q8N1W1 1705 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 DCXO43602 365 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FAM20BO75063 409 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TSHRP16473 764 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PRIM2P49643 509 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ARPP19P56211 112 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 EIF6P56537 245 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 KCNK10P57789 538 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RAD51Q06609 339 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PPIL2Q13356 520 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ADGRE1Q14246 886 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 WDR72Q3MJ13 1102 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FASTKD1Q53R41 847 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CENPPQ6IPU0 288 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 LRRC8DQ7L1W4 858 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PAGE2Q7Z2X7 111 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ADGRG6Q86SQ4 1221 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 NLGN1Q8N2Q7 840 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 LEMD2Q8NC56 503 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TMEM35BQ8NCS4 154 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SLC30A5Q8TAD4 765 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 AFG1LQ8WV93 481 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 GATA6Q92908 595 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ATP6V1E2Q96A05 226 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PGBD4Q96DM1 585 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SPRTNQ9H040 489 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CHORDC1Q9UHD1 332 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TAF6LQ9Y6J9 622 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 I3L521 148 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 MAGEB3O15480 346 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TRIM13O60858 407 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TOMM70O94826 608 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CHRNB1P11230 501 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 BMP6P22004 513 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 GUCY1A2P33402 732 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PRKAA2P54646 552 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 OR2B6P58173 313 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 GSTM4Q03013 218 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 LGALS3BPQ08380 585 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CAPRIN1Q14444 709 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 MROH9Q5TGP6 573 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 DPP8Q6V1X1 898 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SH3RF1Q7Z6J0 888 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TMEM126BQ8IUX1 230 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 DDIASQ8IXT1 998 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TNS4Q8IZW8 715 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 LARGE2Q8N3Y3 721 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ZSWIM2Q8NEG5 633 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RP9Q8TA86 221 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 C10orf82Q8WW14 230 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 HDAC2Q92769 488 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FAM162AQ96A26 154 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 AGAP3Q96P47 875 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ZC3H12CQ9C0D7 883 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CCNB1IP1Q9NPC3 277 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CCDC85CA6NKD9 419 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 LOC110117498-PIK3R3F6TDL0 507 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 CLPXO76031 633 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SLC4A1P02730 911 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 RARBP10826 455 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 FGFR3P22607 806 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 RBL1P28749 1068 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 FMO5P49326 533 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 CARTPTQ16568 116 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 CLPPQ16740 277 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PGS1Q32NB8 556 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 BICRALQ6AI39 1079 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ERICH5Q6P6B1 374 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 MYO1HQ8N1T3 1032 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 FAR1Q8WVX9 515 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PIK3R3Q92569 461 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 VPS35Q96QK1 796 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 YME1L1Q96TA2 773 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 FAM213AQ9BRX8 229 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 TEX12Q9BXU0 123 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 NMUR2Q9GZQ4 415 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 ASNSD1Q9NWL6 643 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 BFARQ9NZS9 450 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 IFT52Q9Y366 437 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 SNAP23O00161 211 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 OR7A10O76100 309 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 NTRK1P04629 796 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 C6orf222P0C671 652 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-202ENST00000444237 CDK4P11802 303 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 NPR3P17342 541 aa5.27□□□□□ -1.57
SCN11A-202ENST00000444237 PRDX6P30041 224 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms