RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 GLIS1Q8NBF1 620 aa5.16□□□□□ -1.58
HERC1-201ENST00000443617 RP9Q8TA86 221 aaKnown RBP5.16□□□□□ -1.58
HERC1-201ENST00000443617 CCDC17Q96LX7 622 aa5.16□□□□□ -1.58
HERC1-201ENST00000443617 TBC1D22BQ9NU19 505 aa5.16□□□□□ -1.58
HERC1-201ENST00000443617 MID2Q9UJV3 735 aa5.16□□□□□ -1.58
HERC1-201ENST00000443617 CDH7Q9ULB5 785 aa5.16□□□□□ -1.58
HERC1-201ENST00000443617 FAM86B1E9PN63 330 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 SERPINB2P05120 415 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 FAM86B2P0C5J1 330 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 TBXAS1P24557 533 aaPredicted RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 GNA15P30679 374 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 POLD3Q15054 466 aaPredicted RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 AKAP14Q86UN6 197 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 MINDY2Q8NBR6 621 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 LMO3Q8TAP4 145 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 EBF4Q9BQW3 602 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 SLC4A5Q9BY07 1137 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 WDR12Q9GZL7 423 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 ANKRD26Q9UPS8 1709 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 C16orf96A6NNT2 1141 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 FCGR1AP12314 374 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 BCAR1P56945 870 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 PTK2BQ14289 1009 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 PDPK2PQ6A1A2 396 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 SENP6Q9GZR1 1112 aaPredicted RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 HNRNPDLO14979 420 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 GRIN3BO60391 1043 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 CRCPO75575 148 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 HLA-DRAP01903 254 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 C16orf46Q6P387 395 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 MON1BQ7L1V2 547 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 CYP2U1Q7Z449 544 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 OLIG1Q8TAK6 271 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 C12orf43Q96C57 262 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 DACH2Q96NX9 599 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 PPP1R10Q96QC0 940 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 SACM1LQ9NTJ5 587 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 GPRC5DQ9NZD1 345 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 KPNA7A9QM74 516 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 FGFR3P22607 806 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 EMP3P54852 163 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 PRKCQQ04759 706 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 CYP4A22Q5TCH4 519 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 HELQQ8TDG4 1101 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 TEKT3Q9BXF9 490 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 HACD3Q9P035 362 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 NWD1Q149M9 1564 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 WDR27A2RRH5 827 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 HSPA1AP0DMV8 641 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 HSPA1BP0DMV9 641 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 P4HA1P13674 534 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 CCNA2P20248 432 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 EPGNQ6UW88 154 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 FAR2Q96K12 515 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 ZNF512Q96ME7 567 aaPredicted RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 MTG1Q9BT17 334 aaPredicted RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 MRPL11Q9Y3B7 192 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 CLTCQ00610 1675 aaKnown RBP5.15□□□□□ -1.58
HERC1-201ENST00000443617 TISP43B9A030 160 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 E5RJQ4 531 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 MYO1DO94832 1006 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 APOA1P02647 267 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 GAD2Q05329 585 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 KLF10Q13118 480 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 TEX44Q53QW1 395 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 JADE1Q6IE81 842 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 XPNPEP1Q9NQW7 623 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 VTI1BQ9UEU0 232 aa5.15□□□□□ -1.58
HERC1-201ENST00000443617 TRPC5OSA6NMA1 111 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 CDH6P55285 790 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 CDKL1Q00532 357 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 PRKAA1Q13131 559 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 ANKDD1AQ495B1 522 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 CCNYL2Q5T2Q4 361 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 VWA5B1Q5TIE3 1220 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 CLEC10AQ8IUN9 316 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 PLD3Q8IV08 490 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 RASSF5Q8WWW0 418 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 RCN3Q96D15 328 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 BEGAINQ9BUH8 593 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 YTHDF1Q9BYJ9 559 aaKnown RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 TPK1Q9H3S4 243 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 H0YIN7 160 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 TMEM191BP0C7N4 346 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 PEX3P56589 373 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 KLF1Q13351 362 aaPredicted RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 GRIN3AQ8TCU5 1115 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 ELMO3Q96BJ8 720 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 SGF29Q96ES7 293 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 MFSD14AQ96MC6 490 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 VTA1Q9NP79 307 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 ZNRF3Q9ULT6 936 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 HEATR9A2RTY3 570 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 ADAM17P78536 824 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 TBC1D10BQ4KMP7 808 aaPredicted RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 TATDN1Q6P1N9 297 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 POLNQ7Z5Q5 900 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 PHF13Q86YI8 300 aaPredicted RBP5.15□□□□□ -1.59
HERC1-201ENST00000443617 RNF148Q8N7C7 305 aa5.15□□□□□ -1.59
HERC1-201ENST00000443617 BPIFB6Q8NFQ5 453 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms