RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 WDR27A2RRH5 827 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 STK25O00506 426 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 KIF3CO14782 793 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 DDX3YO15523 660 aaKnown RBP8.98□□□□□ -0.97
CCDC113-202ENST00000443128 RHOBTB1O94844 696 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 VNN1O95497 513 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 MATKP42679 507 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 SCNN1BP51168 640 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 KDSRQ06136 332 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 ENPEPQ07075 957 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 PLD1Q13393 1074 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 GRB14Q14449 540 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 SLC45A4Q5BKX6 768 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 SDHAF4Q5VUM1 108 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 MRNIPQ6NTE8 343 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.98□□□□□ -0.97
CCDC113-202ENST00000443128 XYLT1Q86Y38 959 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 TMEM192Q8IY95 271 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 ZNF516Q92618 1163 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 ERP27Q96DN0 273 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 MTBPQ96DY7 904 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 NRDE2Q9H7Z3 1164 aa8.98□□□□□ -0.97
CCDC113-202ENST00000443128 NT5C1B-RDH14C9J2C7 533 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TIMM44O43615 452 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 PIGRP01833 764 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ATXN8OSP0DMR3 200 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 CHRNB2P17787 502 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 FECHP22830 423 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 MGAT1P26572 445 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TNFRSF8P28908 595 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 RENBPP51606 427 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 RHOAP61586 193 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ZNF792Q3KQV3 632 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 C1orf146Q5VVC0 180 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 REM2Q8IYK8 340 aaPredicted RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 LGI2Q8N0V4 545 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ALLCQ8N6M5 410 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 EIF1ADQ8N9N8 165 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 MINDY3Q9H8M7 445 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 DDX20Q9UHI6 824 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TRHDEQ9UKU6 1024 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SLX4Q8IY92 1834 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 GLRA3O75311 464 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ASMTLO95671 621 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SYF2O95926 243 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ENO1P06733 434 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 RPSAP08865 295 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 GOT1P17174 413 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 CDH17Q12864 832 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 BBS12Q6ZW61 710 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TRPM8Q7Z2W7 1104 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SLC4A11Q8NBS3 891 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TFAP2BQ92481 460 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 DPF3Q92784 378 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 FAM161BQ96MY7 647 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 UBXN6Q9BZV1 441 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TBC1D13Q9NVG8 400 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 DRG1Q9Y295 367 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SLC27A5Q9Y2P5 690 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 NHSQ6T4R5 1651 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SUPT3HB4E1H0 165 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 PPFIA2O75334 1257 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SUPT3HO75486 399 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 PYGBP11216 843 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 PAX3P23760 479 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SERPINB8P50452 374 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 CLCNKBP51801 687 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 OVGP1Q12889 678 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 FAM83EQ2M2I3 478 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SLC39A4Q6P5W5 647 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 LRRC57Q8N9N7 239 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 MYCBPAPQ8TBZ2 947 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ZBED3Q96IU2 234 aaPredicted RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ZNF670Q9BS34 389 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ATXN3LQ9H3M9 355 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ETNK2Q9NVF9 386 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 PCDHGC3Q9UN70 934 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 GOLGB1Q14789 3259 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TTLL13PA6NNM8 815 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 USP12O75317 370 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ZNF135P52742 658 aaPredicted RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 MGAT5Q09328 741 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 EFTUD2Q15029 972 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 DDR2Q16832 855 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SYTL3Q4VX76 610 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 SLC24A5Q71RS6 500 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 TIAM2Q8IVF5 1701 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ARID3BQ8IVW6 561 aaPredicted RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 DDX60Q8IY21 1712 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 LRRN4Q8WUT4 740 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 USP13Q92995 863 aaPredicted RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ZNF558Q96NG5 402 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 UPF3AQ9H1J1 476 aaKnown RBP8.97□□□□□ -0.97
CCDC113-202ENST00000443128 HIPK3Q9H422 1215 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ATP13A1Q9HD20 1204 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ERVK-5Q9HDB9 667 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 CNGB3Q9NQW8 809 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 CRLS1Q9UJA2 301 aa8.97□□□□□ -0.97
CCDC113-202ENST00000443128 ANGPTL2Q9UKU9 493 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms