RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 NPC1O15118 1278 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 BCAT2O15382 392 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 SYNCRIPO60506 623 aaKnown RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 RHOBTB3O94955 611 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 MYL1P05976 194 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 HLA-EP13747 358 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 TRIM21P19474 475 aaKnown RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 HOXD9P28356 352 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 NDUFA8P51970 172 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 YWHAGP61981 247 aaKnown RBP eCLIP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 ENPEPQ07075 957 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 SCAPQ12770 1279 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 DPYDQ12882 1025 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 HNRNPDQ14103 355 aaKnown RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 EIF4HQ15056 248 aaKnown RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 RAB41Q5JT25 222 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 DCAF12L1Q5VU92 463 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 LRSAM1Q6UWE0 723 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 SERPINA13PQ6UXR4 307 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 RSRC2Q7L4I2 434 aaKnown RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 SLCO6A1Q86UG4 719 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 FAM124AQ86V42 546 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 FAM217AQ8IXS0 508 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 CPXM2Q8N436 756 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 SPRYD3Q8NCJ5 442 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 CADM4Q8NFZ8 388 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 PRCCQ92733 491 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 SIPA1Q96FS4 1042 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 CDK5RAP1Q96SZ6 601 aaKnown RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 DCLK3Q9C098 648 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 ZDHHC5Q9C0B5 715 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 CIPCQ9C0C6 399 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 TMEM8AQ9HCN3 771 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 CISHQ9NSE2 258 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 USP25Q9UHP3 1055 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 EIF2B4Q9UI10 523 aaKnown RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 PCOLCE2Q9UKZ9 415 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 ZNF510Q9Y2H8 683 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 PLXNB3Q9ULL4 1909 aa8.73□□□□□ -1.01
TOP3B-209ENST00000442653 MUC22E2RYF6 1773 aaPredicted RBP8.73□□□□□ -1.01
TOP3B-209ENST00000442653 ZBED1O96006 694 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 EPHX1P07099 455 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 KRT13P13646 458 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 HLA-FP30511 346 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 OXTRP30559 389 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 RDXP35241 583 aaKnown RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 PSMC2P35998 433 aaKnown RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 SYKP43405 635 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 MXI1P50539 228 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 TKTL1P51854 596 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ZNF132P52740 706 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ADAM9Q13443 819 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 CAMK2GQ13555 558 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 GOLGA7BQ2TAP0 167 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 HLA-BQ31612 363 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ARHGAP17Q68EM7 881 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 KRT39Q6A163 491 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 PM20D1Q6GTS8 502 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 CCNI2Q6ZMN8 369 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 GLRX5Q86SX6 157 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ZC3H3Q8IXZ2 948 aaKnown RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 SMYD4Q8IYR2 804 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 GUF1Q8N442 669 aaKnown RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ZNF366Q8N895 744 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ANKRD52Q8NB46 1076 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 CCDC150Q8NCX0 1101 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 BAHD1Q8TBE0 780 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 SETD7Q8WTS6 366 aaKnown RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 DDI1Q8WTU0 396 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 CYB5D2Q8WUJ1 264 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 UCMAQ8WVF2 138 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 TATDN2Q93075 761 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 PLD4Q96BZ4 506 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 TMEM176AQ96HP8 235 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 DCBLD2Q96PD2 775 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 NUP58Q9BVL2 599 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ULBP1Q9BZM6 244 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 TMEM245Q9H330 911 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 C6orf106Q9H6K1 298 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 GAREM1Q9H706 876 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 TOR4AQ9NXH8 423 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 STRIP2Q9ULQ0 834 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 ZDHHC9Q9Y397 364 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 GOLGA4Q13439 2230 aaKnown RBP8.72□□□□□ -1.01
TOP3B-209ENST00000442653 PTPRBP23467 1997 aa8.72□□□□□ -1.01
TOP3B-209ENST00000442653 FAM237AA0A1B0GTK4 181 aa8.71□□□□□ -1.02
TOP3B-209ENST00000442653 A0A1B0GVT2 93 aa8.71□□□□□ -1.02
TOP3B-209ENST00000442653 YJEFN3A6XGL0 299 aa8.71□□□□□ -1.02
TOP3B-209ENST00000442653 E7ENQ6 273 aa8.71□□□□□ -1.02
TOP3B-209ENST00000442653 MSI1O43347 362 aaKnown RBP8.71□□□□□ -1.02
TOP3B-209ENST00000442653 TSPAN3O60637 253 aa8.71□□□□□ -1.02
TOP3B-209ENST00000442653 CYBBP04839 570 aa8.71□□□□□ -1.02
TOP3B-209ENST00000442653 ATXN1LP0C7T5 689 aaKnown RBP8.71□□□□□ -1.02
TOP3B-209ENST00000442653 ZNF883P0CG24 379 aa8.71□□□□□ -1.02
TOP3B-209ENST00000442653 C7P10643 843 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms