RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 EDN1P05305 212 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CKMP06732 381 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 HOXB2P14652 356 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 KCNE1P15382 129 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 FERP16591 822 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TCP1P17987 556 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 GABRG2P18507 467 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CR2P20023 1033 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 NMT1P30419 496 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 KRT9P35527 623 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CYLC1P35663 651 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 OPRD1P41143 372 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 GRM5P41594 1212 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 COPB1P53618 953 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CLDN6P56747 220 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 ELF3P78545 371 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 VAC14Q08AM6 782 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 USP4Q13107 963 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 MYBPC2Q14324 1141 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 ZNF77Q15935 545 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 MEA1Q16626 185 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 PTPRNQ16849 979 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TSR1Q2NL82 804 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CCDC122Q5T0U0 273 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 HES3Q5TGS1 186 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 AGBL2Q5U5Z8 902 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TXNDC8Q6A555 127 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 ALKAL1Q6UXT8 129 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 DSTYKQ6XUX3 929 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 BZW1Q7L1Q6 419 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 MAEAQ7L5Y9 396 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SDCCAG8Q86SQ7 713 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CREG2Q8IUH2 290 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SLFN12Q8IYM2 578 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TRIM22Q8IYM9 498 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CACNA2D3Q8IZS8 1091 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TTC9BQ8N6N2 239 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 DRAXINQ8NBI3 349 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TSEN2Q8NCE0 465 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 RIN3Q8TB24 985 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CENPTQ96BT3 561 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 IQCDQ96DY2 449 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SPDL1Q96EA4 605 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 GSDMAQ96QA5 445 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 HSD17B14Q9BPX1 270 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 EIF2AK1Q9BQI3 630 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 NUP58Q9BVL2 599 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TMBIM4Q9HC24 238 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 NOD2Q9HC29 1040 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 ZDHHC4Q9NPG8 344 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 GPRC5CQ9NQ84 441 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 GMIPQ9P107 970 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 HSFX1Q9UBD0 423 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SERTAD1Q9UHV2 236 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 CAPN11Q9UMQ6 739 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SNX12Q9UMY4 172 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 PCDHGA1Q9Y5H4 931 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 TIMM13Q9Y5L4 95 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 SRPRBQ9Y5M8 271 aaKnown RBP6.79□□□□□ -1.32
HDAC6-210ENST00000441703 DOPEY1Q5JWR5 2465 aa6.79□□□□□ -1.32
HDAC6-210ENST00000441703 KNL1Q8NG31 2342 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 TRAV19A0A0A6YYK7 116 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 EME2A4GXA9 379 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 ZNF233A6NK53 670 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 M0QZQ0 153 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 ENC1O14682 589 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 KLK10O43240 276 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 CCNT1O60563 726 aaKnown RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 LUC7L3O95232 432 aaKnown RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 DEXIO95424 95 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 USP17L7P0C7H9 530 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 HSPA9P38646 679 aaKnown RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 NAMPTP43490 491 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 CCT8P50990 548 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 EFNA5P52803 228 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 OSTNP61366 133 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 KDSRQ06136 332 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 BIRC3Q13489 604 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 BLMHQ13867 455 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 KRT31Q15323 416 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 CMPK2Q5EBM0 449 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 ATF7IP2Q5U623 682 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 KIAA1614Q5VZ46 1190 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 OVOS1Q6IE37 1185 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 SDE2Q6IQ49 451 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 KIAA1324Q6UXG2 1013 aaKnown RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 USP49Q70CQ1 688 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 MON1AQ86VX9 555 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 ERICH1Q86X53 443 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 SPATA4Q8NEY3 305 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 DEPTORQ8TB45 409 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 KCNE4Q8WWG9 221 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 BSNDQ8WZ55 320 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 CCT6BQ92526 530 aa6.78□□□□□ -1.32
HDAC6-210ENST00000441703 LIN37Q96GY3 246 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-210ENST00000441703 ZMAT2Q96NC0 199 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms