RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 CYBBP04839 570 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 MMP8P22894 467 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 HOXD9P28356 352 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 NOS2P35228 1153 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 TIE1P35590 1138 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 SCNN1AP37088 669 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 ZNF445P59923 1031 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 ARID5AQ03989 594 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 DMC1Q14565 340 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 HSF5Q4G112 596 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 ZC3H12AQ5D1E8 599 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 C10orf76Q5T2E6 689 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 RNF43Q68DV7 783 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 NADSYN1Q6IA69 706 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 TRIM72Q6ZMU5 477 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 ASCL5Q7RTU5 278 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 IRF2BP2Q7Z5L9 587 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 ALYREFQ86V81 257 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 ALLCQ8N6M5 410 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 DDI1Q8WTU0 396 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 ATRIPQ8WXE1 791 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 TMA16Q96EY4 203 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 TTYH3Q9C0H2 523 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 SEMA4AQ9H3S1 761 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 MMP17Q9ULZ9 603 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 SLC8A2Q9UPR5 921 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 SLC27A6Q9Y2P4 619 aa16.56■□□□□ 0.24
TRAPPC12-209ENST00000441099 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 UNGP13051 313 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 FERP16591 822 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 SLC6A4P31645 630 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 PBX1P40424 430 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 MATKP42679 507 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 FNTBP49356 437 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 SGSHP51688 502 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 PIK3R6Q5UE93 754 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 OTUD1Q5VV17 481 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 RFWD3Q6PCD5 774 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 NUDT18Q6ZVK8 323 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 WDR5BQ86VZ2 330 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 CCDC33Q8N5R6 958 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 CAMKK1Q8N5S9 505 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 MSANTD4Q8NCY6 345 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 KCNV2Q8TDN2 545 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 NKD2Q969F2 451 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 NT5C3BQ969T7 300 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 MYEOVQ96EZ4 313 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 ADAM33Q9BZ11 813 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 IRX2Q9BZI1 471 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 DDIT4Q9NX09 232 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 CALCOCO1Q9P1Z2 691 aa16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 XPO7Q9UIA9 1087 aaKnown RBP16.55■□□□□ 0.24
TRAPPC12-209ENST00000441099 PRR23AA6NEV1 266 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 LRRC53A6NM62 1247 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 KCNU1A8MYU2 1149 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 SGK1O00141 431 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 ADAM23O75077 832 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 KLF8O95600 359 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 GBP1P32455 592 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 PXNP49023 591 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 UBASH3AP57075 661 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 RNASE9P60153 205 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 PTP4A2Q12974 167 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 GEN1Q17RS7 908 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 CLEC16AQ2KHT3 1053 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 MPP7Q5T2T1 576 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 FAM102AQ5T9C2 384 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 HEATR6Q6AI08 1181 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 MMS22LQ6ZRQ5 1243 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 LONP2Q86WA8 852 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 TXNDC5Q8NBS9 432 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 SLC30A5Q8TAD4 765 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 OLIG1Q8TAK6 271 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 HHIPQ96QV1 700 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 NPY6RQ99463 290 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 AGPAT1Q99943 283 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 SYT11Q9BT88 431 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 SLC2A11Q9BYW1 496 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 NUCKS1Q9H1E3 243 aaKnown RBP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 FAM204AQ9H8W3 233 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 ZDHHC4Q9NPG8 344 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.54■□□□□ 0.245e-7■■■■□ 20.2
TRAPPC12-209ENST00000441099 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 TMEM59LQ9UK28 342 aa16.54■□□□□ 0.24
TRAPPC12-209ENST00000441099 VPS13AQ96RL7 3174 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 HELZP42694 1942 aaKnown RBP16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 SYNJ2BP-COX16A0A087WUM0 186 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 CCDC163A0A0D9SF12 145 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 HRO43593 1189 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 MOCS2O96007 188 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 APOEP02649 317 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 CCDC172P0C7W6 258 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 HNRNPLP14866 589 aaKnown RBP eCLIP16.53■□□□□ 0.244e-8■□□□□ 10.1
TRAPPC12-209ENST00000441099 TFE3P19532 575 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 CCR1P32246 355 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 CENPCQ03188 943 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 CRY1Q16526 586 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 FIGNQ5HY92 759 aa16.53■□□□□ 0.24
TRAPPC12-209ENST00000441099 MS4A13Q5J8X5 152 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms