RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 NELFBQ8WX92 580 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 PIGKQ92643 395 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 SMARCD2Q92925 531 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 TMEM143Q96AN5 459 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 FAM167AQ96KS9 214 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 DUSP9Q99956 384 aaKnown RBP5.14□□□□□ -1.59
PTPN4-206ENST00000441089 COLEC11Q9BWP8 271 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 INO80BQ9C086 356 aaPredicted RBP5.14□□□□□ -1.59
PTPN4-206ENST00000441089 POLR3FQ9H1D9 316 aaPredicted RBP5.14□□□□□ -1.59
PTPN4-206ENST00000441089 EPB41L4BQ9H329 900 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 KCTD10Q9H3F6 313 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 ZHX3Q9H4I2 956 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 RSAD1Q9HA92 442 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 GRPEL1Q9HAV7 217 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 PARVGQ9HBI0 331 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 UBN1Q9NPG3 1134 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 OLFML3Q9NRN5 406 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 NRBP2Q9NSY0 501 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 MARCH5Q9NX47 278 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 KIAA1522Q9P206 1035 aaPredicted RBP5.14□□□□□ -1.59
PTPN4-206ENST00000441089 DNMT3BQ9UBC3 853 aaKnown RBP5.14□□□□□ -1.59
PTPN4-206ENST00000441089 EBF1Q9UH73 591 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 IL17BQ9UHF5 180 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 SRPK3Q9UPE1 567 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 COL4A3BPQ9Y5P4 624 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 ZMYM2Q9UBW7 1377 aa5.14□□□□□ -1.59
PTPN4-206ENST00000441089 NUP210Q8TEM1 1887 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 MYO16Q9Y6X6 1858 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CELSR1Q9NYQ6 3014 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 SLC38A8A6NNN8 435 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 H3BS24 57 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ARNTLO00327 626 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 IKBKBO14920 756 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 SLC16A4O15374 487 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 TGFB1I1O43294 461 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 NUAK1O60285 661 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 MAFO75444 373 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 LRIG2O94898 1065 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 SLITRK5O94991 958 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 APBB3O95704 486 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 EDN1P05305 212 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 RHOP08100 348 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ATP1A3P13637 1013 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ZNF18P17022 549 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CEBPBP17676 345 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 GAP43P17677 238 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 PTPN2P17706 415 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 GLDCP23378 1020 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ITPKBP27987 946 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 HOXD12P35452 270 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 NPTX2P47972 431 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 DHPSP49366 369 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CLCN3P51790 818 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 PEX3P56589 373 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 RPS26P62854 115 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 MYL5Q02045 173 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 RHDQ02161 417 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 GFPT1Q06210 699 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 PAK1Q13153 545 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CAPSQ13938 189 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 PON2Q15165 354 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 BMT2Q1RMZ1 405 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CT47A1Q5JQC4 288 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 RALGPS1Q5JS13 557 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CDKAL1Q5VV42 579 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ANKRD40Q6AI12 368 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CENPPQ6IPU0 288 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 FUT10Q6P4F1 479 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ZNF720Q7Z2F6 126 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 HAUS6Q7Z4H7 955 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 RABEPKQ7Z6M1 372 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 IRF2BP1Q8IU81 584 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 SYT12Q8IV01 421 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ZC3H3Q8IXZ2 948 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 COLGALT2Q8IYK4 626 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 GUF1Q8N442 669 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 PNPLA1Q8N8W4 532 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 TMEM161BQ8NDZ6 487 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 MCPH1Q8NEM0 835 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CEP76Q8TAP6 659 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ZNF507Q8TCN5 953 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 RELTQ969Z4 430 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CCDC47Q96A33 483 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 DHTKD1Q96HY7 919 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ZNF668Q96K58 619 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 CCDC43Q96MW1 224 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 TIPINQ9BVW5 301 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 GCOM2Q9BZD3 368 aaPredicted RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ST6GALNAC4Q9H4F1 302 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 MRPL44Q9H9J2 332 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 TRPV4Q9HBA0 871 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 SAMSN1Q9NSI8 373 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 FANCLQ9NW38 375 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 HCFC1R1Q9NWW0 138 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ANKMY1Q9P2S6 941 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 SEL1LQ9UBV2 794 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 RWDD2AQ9UIY3 292 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 PIN4Q9Y237 131 aaKnown RBP5.13□□□□□ -1.59
PTPN4-206ENST00000441089 NFE2L3Q9Y4A8 694 aa5.13□□□□□ -1.59
PTPN4-206ENST00000441089 ST14Q9Y5Y6 855 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms