RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 DLL3Q9NYJ7 618 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 EURLQ9NYK6 297 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 NKIRAS1Q9NYS0 192 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 PCSK1NQ9UHG2 260 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 RSPH14Q9UHP6 348 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 DSEQ9UL01 958 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 AP4E1Q9UPM8 1137 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 SMG5Q9UPR3 1016 aaKnown RBP9.48□□□□□ -0.89
HDAC6-209ENST00000440653 RAD54BQ9Y620 910 aa9.48□□□□□ -0.89
HDAC6-209ENST00000440653 NLRC5Q86WI3 1866 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 H3BRJ5 948 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 GABRDO14764 452 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ALOX15BO15296 676 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 STK10O94804 968 aaKnown RBP9.47□□□□□ -0.89
HDAC6-209ENST00000440653 THP07101 528 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 GSTA2P09210 222 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CCDC130P13994 396 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CHN1P15882 459 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ADORA2BP29275 332 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 STX2P32856 288 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ARL4AP40617 200 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 HDAC4P56524 1084 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 WDR5P61964 334 aaKnown RBP9.47□□□□□ -0.89
HDAC6-209ENST00000440653 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-209ENST00000440653 GRIK3Q13003 919 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 KYNUQ16719 465 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CDO1Q16878 200 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CCDC142Q17RM4 750 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 C15orf59Q2T9L4 293 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-209ENST00000440653 SLC25A52Q3SY17 297 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CCDC38Q502W7 563 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ANKRD20A8PQ5CZ79 823 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 EFHC2Q5JST6 749 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 TRNP1Q6NT89 227 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 DARS2Q6PI48 645 aaKnown RBP9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ZBED8Q8IZ13 594 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CACNA2D3Q8IZS8 1091 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 SCML4Q8N228 414 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ANKS4BQ8N8V4 417 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 TMEM105Q8N8V8 129 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 FBXO22Q8NEZ5 403 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 SLC2A14Q8TDB8 520 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 DYDC1Q8WWB3 177 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CPT1BQ92523 772 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 PGBD4Q96DM1 585 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 SMARCD1Q96GM5 515 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CCT8L2Q96SF2 557 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 FAM118BQ9BPY3 351 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 DPEP3Q9H4B8 488 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ACSS3Q9H6R3 686 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 CDH9Q9ULB4 789 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 FAM208BQ5VWN6 2430 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 TANC1Q9C0D5 1861 aa9.47□□□□□ -0.89
HDAC6-209ENST00000440653 ASPMQ8IZT6 3477 aa9.46□□□□□ -0.89
HDAC6-209ENST00000440653 LOC730098B7Z3J9 87 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 C9IYK1 514 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 H7C0C1 242 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 CYB561D2O14569 222 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SPTLC1O15269 473 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 INPPL1O15357 1258 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 PRPF4O43172 522 aaKnown RBP eCLIP9.46□□□□□ -0.96e-9■□□□□ 9
HDAC6-209ENST00000440653 ZNF623O75123 536 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 CD48P09326 243 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 FGFR1P11362 822 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 TPSB2P20231 275 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 CYP2F1P24903 491 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 NOS2P35228 1153 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 RPL22P35268 128 aaKnown RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 MLH1P40692 756 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SLCO1A2P46721 670 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 ATP5OP48047 213 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SULT1E1P49888 294 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 NUBP1P53384 320 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 CORO7P57737 925 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 BASP1P80723 227 aaKnown RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 ATP11AP98196 1134 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 ADIGQ0VDE8 80 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SCAPQ12770 1279 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 PDIA2Q13087 525 aaKnown RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 PTK7Q13308 1070 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 ITIH4Q14624 930 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 KCNJ11Q14654 390 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 TPSAB1Q15661 275 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 MAPRE1Q15691 268 aaKnown RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 TCTN1Q2MV58 587 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SLC45A4Q5BKX6 768 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 TTC19Q6DKK2 380 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 FAM117BQ6P1L5 589 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 MRPL10Q7Z7H8 261 aaKnown RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 FAM35AQ86V20 835 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 TAX1BP1Q86VP1 789 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 PLD5Q8N7P1 536 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 GLIS1Q8NBF1 620 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 PYROXD1Q8WU10 500 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 IRGQQ8WZA9 623 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 NTAN1Q96AB6 310 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 ALKBH8Q96BT7 664 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms