RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.75■□□□□ 0.59
CPSF4-205ENST00000440514 ADAM22Q9P0K1 906 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 XPO7Q9UIA9 1087 aaKnown RBP18.75■□□□□ 0.59
CPSF4-205ENST00000440514 STOML2Q9UJZ1 356 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 CAPN11Q9UMQ6 739 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 M0QYT0 321 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 GFRA2O00451 464 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 ACSL4O60488 711 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 KAT7O95251 611 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 APOEP02649 317 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 APODP05090 189 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 CASP14P31944 242 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 SLC11A2P49281 568 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 ZBED6P86452 979 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 EIF4EBP2Q13542 120 aaPredicted RBP18.74■□□□□ 0.59
CPSF4-205ENST00000440514 TDRD12Q587J7 1177 aaKnown RBP18.74■□□□□ 0.59
CPSF4-205ENST00000440514 ADGRF1Q5T601 910 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 GRAMD4Q6IC98 578 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 GAS2L3Q86XJ1 694 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 VSTM4Q8IW00 320 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 MAML2Q8IZL2 1156 aaPredicted RBP18.74■□□□□ 0.59
CPSF4-205ENST00000440514 XPO6Q96QU8 1125 aaKnown RBP18.74■□□□□ 0.59
CPSF4-205ENST00000440514 TBCBQ99426 244 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 NPY6RQ99463 290 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 IER2Q9BTL4 223 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 DEC1Q9P2X7 70 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 TMEM59LQ9UK28 342 aa18.74■□□□□ 0.59
CPSF4-205ENST00000440514 LUC7L2Q9Y383 392 aaKnown RBP18.74■□□□□ 0.59
CPSF4-205ENST00000440514 TMCO5BA8MYB1 307 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 K7EQS6 105 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 LAMTOR5O43504 91 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 CYBBP04839 570 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 CALB1P05937 261 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 GBP1P32455 592 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 PTPN5P54829 565 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 SATB1Q01826 763 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 HGSNATQ68CP4 663 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 SPECC1LQ69YQ0 1117 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 ACAD10Q6JQN1 1059 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 TSSK4Q6SA08 328 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 DNAAF5Q86Y56 855 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 SYNPOQ8N3V7 929 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 SPEM1Q8N4L4 309 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 TERB1Q8NA31 727 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 RPLP0P6Q8NHW5 317 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 JOSD2Q8TAC2 188 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 DDI1Q8WTU0 396 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 MYEOVQ96EZ4 313 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 CFAP57Q96MR6 1250 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 PRICKLE1Q96MT3 831 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-205ENST00000440514 NUCKS1Q9H1E3 243 aaKnown RBP18.73■□□□□ 0.59
CPSF4-205ENST00000440514 PRMT8Q9NR22 394 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-205ENST00000440514 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-205ENST00000440514 CLEC4EQ9ULY5 219 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 STAP1Q9ULZ2 295 aa18.73■□□□□ 0.59
CPSF4-205ENST00000440514 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.73■□□□□ 0.59
CPSF4-205ENST00000440514 DDX3XO00571 662 aaKnown RBP eCLIP18.72■□□□□ 0.59
CPSF4-205ENST00000440514 HOXD9P28356 352 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-205ENST00000440514 GRIA2P42262 883 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 DGKGP49619 791 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 GSCP56915 257 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-205ENST00000440514 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
CPSF4-205ENST00000440514 FBXO43Q4G163 708 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 MPPE1Q53F39 396 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 C10orf76Q5T2E6 689 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 RAP1GAP2Q684P5 730 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 SARM1Q6SZW1 724 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 RNF34Q969K3 372 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 PIGVQ9NUD9 493 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 FAM86C1Q9NVL1 165 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 RRN3Q9NYV6 651 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 ATG2BQ96BY7 2078 aa18.72■□□□□ 0.59
CPSF4-205ENST00000440514 PLEKP08567 350 aaPredicted RBP18.71■□□□□ 0.59
CPSF4-205ENST00000440514 CHRM1P11229 460 aaPredicted RBP18.71■□□□□ 0.59
CPSF4-205ENST00000440514 HOXC13P31276 330 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 CCR1P32246 355 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 CCR3P51677 355 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 ATXN1P54253 815 aaKnown RBP18.71■□□□□ 0.59
CPSF4-205ENST00000440514 CSTF1Q05048 431 aaKnown RBP18.71■□□□□ 0.59
CPSF4-205ENST00000440514 SLC25A52Q3SY17 297 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 C2orf27AQ580R0 203 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 DNAJC24Q6P3W2 148 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 CHSY1Q86X52 802 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 MCOLN2Q8IZK6 566 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 ATP6V0D2Q8N8Y2 350 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 C3orf20Q8ND61 904 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 USP33Q8TEY7 942 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 SYN2Q92777 582 aaPredicted RBP18.71■□□□□ 0.59
CPSF4-205ENST00000440514 NT5C3BQ969T7 300 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 AZIN2Q96A70 460 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 BTN2A3PQ96KV6 586 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 ZDHHC4Q9NPG8 344 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.71■□□□□ 0.59
CPSF4-205ENST00000440514 CACNA1IQ9P0X4 2223 aa18.71■□□□□ 0.59
CPSF4-205ENST00000440514 TCRBV5S1A1TA0A578 114 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 TBC1D3BA6NDS4 549 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 KCNU1A8MYU2 1149 aa18.7■□□□□ 0.58
CPSF4-205ENST00000440514 ATMINO43313 823 aaPredicted RBP18.7■□□□□ 0.58
CPSF4-205ENST00000440514 TBL1XO60907 577 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms