RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ELOVL4Q9GZR5 314 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 SNTG2Q9NY99 539 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 TXNDC16Q9P2K2 825 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 PGAP2Q9UHJ9 254 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 APOBEC2Q9Y235 224 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 ASB3Q9Y575 518 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 DYNC1LI2O43237 492 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 USP12O75317 370 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 MAFO75444 373 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 HMGCRP04035 888 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 DESP17661 470 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 KDELR1P24390 212 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 ACAT1P24752 427 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 RBL1P28749 1068 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 SDC4P31431 198 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 SKIV2L2P42285 1042 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 EFHC1Q5JVL4 640 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 CYP2R1Q6VVX0 501 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 CPNE9Q8IYJ1 553 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARHGAP18Q8N392 663 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 MTMR14Q8NCE2 650 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 CPT1BQ92523 772 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 LRGUKQ96M69 825 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 OSMRQ99650 979 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 MED10Q9BTT4 135 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 SDCBP2Q9H190 292 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 IL1RL2Q9HB29 575 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 GOLGA2P5Q9HBQ8 144 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 MTO1Q9Y2Z2 717 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 DTNAQ9Y4J8 743 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 TIMM13Q9Y5L4 95 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 TYROBPO43914 113 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 IQCF3P0C7M6 154 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 P4HA1P13674 534 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 VCLP18206 1134 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 CDKN2BP42772 138 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 CCR10P46092 362 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 NME5P56597 212 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 FOLH1Q04609 750 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 OLIG2Q13516 323 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 CCDC142Q17RM4 750 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 PAN2Q504Q3 1202 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 LBX2Q6XYB7 198 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 PCGF5Q86SE9 256 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 SPATA6LQ8N4H0 392 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ALLCQ8N6M5 410 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 FAM172AQ8WUF8 416 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 TMEM176AQ96HP8 235 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 TTC25Q96NG3 672 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 APOL2Q9BQE5 337 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 WDR55Q9H6Y2 383 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 PTPRHQ9HD43 1115 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 DMAP1Q9NPF5 467 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ASNSD1Q9NWL6 643 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ADA2Q9NZK5 511 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 E7ENQ6 273 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 H3BSA7 217 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPEF2O14830 753 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 LIN7AO14910 233 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 RARBP10826 455 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZNF280AP59817 542 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ACVR2BQ13705 512 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ITPRIPL1Q6GPH6 555 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 REPS2Q8NFH8 660 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 GABPB2Q8TAK5 448 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 C18orf25Q96B23 403 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 FAM167AQ96KS9 214 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 GPR20Q99678 358 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 OXCT2Q9BYC2 517 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 SMARCAD1Q9H4L7 1026 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 DPP3Q9NY33 737 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 STRIP2Q9ULQ0 834 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 SNCAIPQ9Y6H5 919 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ACKR2O00590 384 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 WFS1O76024 890 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 GSTA2P09210 222 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 NR4A1P22736 598 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 CDK7P50613 346 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 TBL3Q12788 808 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ITGA9Q13797 1035 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 CTC1Q2NKJ3 1217 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 FAM47CQ5HY64 1035 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPM1LQ5SGD2 360 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 SYDE1Q6ZW31 735 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 PARP8Q8N3A8 854 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 PHTF2Q8N3S3 785 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 GRIN3AQ8TCU5 1115 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 RNF34Q969K3 372 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 CXCL16Q9H2A7 254 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARMC7Q9H6L4 198 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 COL4A5P29400 1685 aa10.24□□□□□ -0.77
CDC42SE1-202ENST00000439374 ANKRD31Q8N7Z5 1873 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 SRGAP2BP0DMP2 458 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CCDC130P13994 396 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARF4P18085 180 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ADARP55265 1226 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 MYBPC3Q14896 1274 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CARTPTQ16568 116 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms