RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ADAM32Q8TC27 787 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 ACTRT2Q8TDY3 377 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 MAGEB5Q9BZ81 275 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 ELP3Q9H9T3 547 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 SYNPO2Q9UMS6 1093 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 OTOFQ9HC10 1997 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 H3BSA7 217 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 K7ERI5 159 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 PIM1P11309 404 aaPredicted RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 CRHR1P34998 444 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 OSTNP61366 133 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 MRPS22P82650 360 aaKnown RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 TAZQ16635 292 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 B3GNT6Q6ZMB0 384 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 CDR2LQ86X02 465 aaPredicted RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 ZC3H15Q8WU90 426 aaKnown RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 ZNF668Q96K58 619 aaPredicted RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 SORT1Q99523 831 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 MYO18AQ92614 2054 aaKnown RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 PHIPQ8WWQ0 1821 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 DGKIO75912 1065 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 TMCC1O94876 653 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 CRTAMO95727 393 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 TRUB2O95900 331 aaKnown RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 ASS1P00966 412 aaKnown RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 PRKCHP24723 683 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 RGS2P41220 211 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 KRT76Q01546 638 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 NOMO1Q15155 1222 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 PPM1LQ5SGD2 360 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 NIPA1Q7RTP0 329 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 KBTBD6Q86V97 674 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 FBXW8Q8N3Y1 598 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 DEPDC1BQ8WUY9 529 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 C17orf75Q9HAS0 396 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 FEM1BQ9UK73 627 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 SCN4AP35499 1836 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 AIM2O14862 343 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 ATP9BO43861 1147 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 PEX10O60683 326 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 KRT38O76015 456 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 METTL18O95568 372 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 HMGCRP04035 888 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 CDKL1Q00532 357 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 CNGA3Q16281 694 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 TRNP1Q6NT89 227 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 CMASQ8NFW8 434 aaPredicted RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 COPS7BQ9H9Q2 264 aaPredicted RBP13.97□□□□□ -0.17
PCNX3-202ENST00000439247 PTTG2Q9NZH5 202 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 HMGXB4Q9UGU5 601 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 WDR81Q562E7 1941 aa13.97□□□□□ -0.17
PCNX3-202ENST00000439247 WDR90Q96KV7 1748 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 GOLGA8QA0A0J9YX86 632 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 GOLGA8OA6NCC3 632 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 GOLGA8NF8WBI6 632 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 TPP1O14773 563 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 DGAT1O75907 488 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 ALDOAP04075 364 aaKnown RBP13.96□□□□□ -0.17
PCNX3-202ENST00000439247 TSHRP16473 764 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 SERPINB5P36952 375 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 RPL5P46777 297 aaKnown RBP13.96□□□□□ -0.17
PCNX3-202ENST00000439247 PCLAFQ15004 111 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 TBCCQ15814 346 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 AMIGO2Q86SJ2 522 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 FAM160B2Q86V87 743 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 XYLT1Q86Y38 959 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 TNS4Q8IZW8 715 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 GRIN3AQ8TCU5 1115 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
PCNX3-202ENST00000439247 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.17
PCNX3-202ENST00000439247 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 PXMP2Q9NR77 195 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 TDRKHQ9Y2W6 561 aaKnown RBP13.96□□□□□ -0.17
PCNX3-202ENST00000439247 RIPK3Q9Y572 518 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 PSAT1Q9Y617 370 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 AP4B1Q9Y6B7 739 aa13.96□□□□□ -0.17
PCNX3-202ENST00000439247 CHADO15335 359 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 PEX1O43933 1283 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 SLC5A2P31639 672 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 SFNP31947 248 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 PKNOX1P55347 436 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.18
PCNX3-202ENST00000439247 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.18
PCNX3-202ENST00000439247 EMC2Q15006 297 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 OGFRL1Q5TC84 451 aaPredicted RBP13.96□□□□□ -0.18
PCNX3-202ENST00000439247 LGSNQ5TDP6 509 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 SCYL2Q6P3W7 929 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF534Q76KX8 674 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 NCAPG2Q86XI2 1143 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 USP13Q92995 863 aaPredicted RBP13.96□□□□□ -0.18
PCNX3-202ENST00000439247 OTUD5Q96G74 571 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 ATXN7L3BQ96GX2 97 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 TCHPQ9BT92 498 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 RBM38Q9H0Z9 239 aaKnown RBP13.96□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 EFR3BQ9Y2G0 817 aa13.96□□□□□ -0.18
PCNX3-202ENST00000439247 ATP6V1G1O75348 118 aa13.95□□□□□ -0.18
PCNX3-202ENST00000439247 ATG7O95352 703 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms