RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 CYP3A43Q9HB55 503 aa9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 APOBEC3GQ9HC16 384 aaKnown RBP9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 CSNK1G1Q9HCP0 422 aa9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 WDR35Q9P2L0 1181 aa9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 MBD1Q9UIS9 605 aaPredicted RBP9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 NAGPAQ9UK23 515 aa9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 NUDT5Q9UKK9 219 aa9.66□□□□□ -0.86
AC011228.1-201ENST00000439027 PCNX2A6NKB5 2137 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CFIP05156 583 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 HOXB2P14652 356 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 TYRP14679 529 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CDC25BP30305 580 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 NTSR1P30989 418 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 PTGER3P43115 390 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 MAPK8P45983 427 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 FMO5P49326 533 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 RPL6Q02878 288 aaKnown RBP9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 KCNC4Q03721 635 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 ENPEPQ07075 957 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 SYCP1Q15431 976 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 MAP7D1Q3KQU3 841 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CBWD6Q4V339 395 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 ZNF394Q53GI3 561 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 TRIM61Q5EBN2 209 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CBWD3Q5JTY5 395 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CBWD5Q5RIA9 395 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 SH3PXD2AQ5TCZ1 1133 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 LYSMD4Q5XG99 296 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 EGFLAMQ63HQ2 1017 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CLEC20AQ6ZU45 233 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 MIB1Q86YT6 1006 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 SYT12Q8IV01 421 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CHPFQ8IZ52 775 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 TERB1Q8NA31 727 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 HEXIM2Q96MH2 286 aaKnown RBP9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 ERGIC2Q96RQ1 377 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 NUSAP1Q9BXS6 441 aaKnown RBP9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 NMUR1Q9HB89 426 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 OSER1Q9NX31 292 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 DNMT3LQ9UJW3 386 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 KIAA1549LQ6ZVL6 1849 aa9.65□□□□□ -0.86
AC011228.1-201ENST00000439027 ATXN2Q99700 1313 aaKnown RBP9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 A0A1W2PQC6 194 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 HHLA1C9JL84 531 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 GREM1O60565 184 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 CILPO75339 1184 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 HMBSP08397 361 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 RALAP11233 206 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 GABRG2P18507 467 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 ITPKAP23677 461 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 GTF2H1P32780 548 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 PBX1P40424 430 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 KLK7P49862 253 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 MXI1P50539 228 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 KIF11P52732 1056 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 ZNF252P-AS1Q0IIN9 211 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 INCA1Q0VD86 236 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 CETN1Q12798 172 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 LMAN2Q12907 356 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 FOXC1Q12948 553 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 SPECC1LQ69YQ0 1117 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 KRT39Q6A163 491 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 SLC36A4Q6YBV0 504 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 GBP6Q6ZN66 633 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 DEFB124Q8NES8 71 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 PDLIM2Q96JY6 352 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 ACOX2Q99424 681 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 DUSP16Q9BY84 665 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 TMEM8AQ9HCN3 771 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 TMEM74BQ9NUR3 256 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 PLK2Q9NYY3 685 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 CALCOCO1Q9P1Z2 691 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 EVLQ9UI08 416 aaPredicted RBP9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 RASAL2Q9UJF2 1139 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 HCN2Q9UL51 889 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 CYP8B1Q9UNU6 501 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 SIK3Q9Y2K2 1263 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 ZFYVE26Q68DK2 2539 aa9.64□□□□□ -0.87
AC011228.1-201ENST00000439027 FAM208BQ5VWN6 2430 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 A0A1W2PQF6 199 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 GTPBP10A4D1E9 387 aaKnown RBP9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 PRRT4C9JH25 899 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 CDX4O14627 284 aaPredicted RBP9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 P4HA2O15460 535 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 CACNG3O60359 315 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 SLC9A1P19634 815 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 PON1P27169 355 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 DPP6P42658 865 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 DGKGP49619 791 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 ATXN3P54252 364 aaPredicted RBP9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 SHC2P98077 582 aa9.63□□□□□ -0.87
AC011228.1-201ENST00000439027 CCDC173Q0VFZ6 552 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms