RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MINDY1Q8N5J2 469 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 DDI1Q8WTU0 396 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 WBP2Q969T9 261 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 FAXDC2Q96IV6 333 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 ACOX2Q99424 681 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 GABRG3Q99928 467 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 MIR1-1HGQ9H1L0 117 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 PRDM16Q9HAZ2 1276 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 LRRC4Q9HBW1 653 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 APOBEC3GQ9HC16 384 aaKnown RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 CISHQ9NSE2 258 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 OLA1Q9NTK5 396 aaKnown RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 TMEM74BQ9NUR3 256 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 OSER1Q9NX31 292 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 HOOK1Q9UJC3 728 aaKnown RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 HPSEQ9Y251 543 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 PCDHB9Q9Y5E1 797 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 RAD54BQ9Y620 910 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 STON1Q9Y6Q2 735 aa8.13□□□□□ -1.11
VPS50-203ENST00000436177 ANKRD11Q6UB99 2663 aaPredicted RBP8.13□□□□□ -1.11
VPS50-203ENST00000436177 FRYQ5TBA9 3013 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 PTPRDP23468 1912 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 ANAPC1Q9H1A4 1944 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 SPAARA0A1B0GVQ0 90 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 A0A1W2PQ27 194 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 A0A1W2PQ64 194 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 SLC12A8A0AV02 714 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 HHLA1C9JL84 531 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 SMC2O95347 1197 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 ZBED1O96006 694 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 SPINK2P20155 84 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 OXTRP30559 389 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 TKTL1P51854 596 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 ZNF445P59923 1031 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 DPYDQ12882 1025 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 STIM1Q13586 685 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 GOLGA7BQ2TAP0 167 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 FUT11Q495W5 492 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 FNDC3BQ53EP0 1204 aaKnown RBP8.12□□□□□ -1.11
VPS50-203ENST00000436177 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 C1orf220Q5T0J3 134 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 PEAR1Q5VY43 1037 aaPredicted RBP8.12□□□□□ -1.11
VPS50-203ENST00000436177 SCD5Q86SK9 330 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 PIGZQ86VD9 579 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 CACUL1Q86Y37 369 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 ZCCHC14Q8WYQ9 949 aaKnown RBP8.12□□□□□ -1.11
VPS50-203ENST00000436177 SNX19Q92543 992 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 PRCCQ92733 491 aaPredicted RBP8.12□□□□□ -1.11
VPS50-203ENST00000436177 GOLGA1Q92805 767 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 PLD4Q96BZ4 506 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 SIPA1Q96FS4 1042 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 EEF2KMTQ96G04 330 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 TMEM176AQ96HP8 235 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 MRGPRX1Q96LB2 322 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 SCNM1Q9BWG6 230 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 GTPBP4Q9BZE4 634 aaKnown RBP8.12□□□□□ -1.11
VPS50-203ENST00000436177 ZDHHC5Q9C0B5 715 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 FSCN3Q9NQT6 498 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 RAB20Q9NX57 234 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 SLC27A6Q9Y2P4 619 aa8.12□□□□□ -1.11
VPS50-203ENST00000436177 TYW5A2RUC4 315 aaKnown RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 UPK3BL1B0FP48 263 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 UPK3BL2E5RIL1 263 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 SLC16A3O15427 465 aaKnown RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 TIMM44O43615 452 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 HYAL3O43820 417 aaPredicted RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 GREM1O60565 184 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 ZNF202O95125 648 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 PENKP01210 267 aaPredicted RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 EPHX1P07099 455 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 C1QTNF9P0C862 333 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 SETSIPP0DME0 302 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 NCAM1P13591 858 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 TBXAS1P24557 533 aaPredicted RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 MFAP3P55082 362 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 BST2Q10589 180 aaKnown RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 CETN1Q12798 172 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 SEMA3BQ13214 749 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 SLC14A1Q13336 389 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 ZNF423Q2M1K9 1284 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 ZCWPW2Q504Y3 356 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 MPPE1Q53F39 396 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 CCDC117Q8IWD4 279 aaPredicted RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 ZNF276Q8N554 614 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 ZCCHC9Q8N567 271 aaKnown RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 ANKRD52Q8NB46 1076 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 TOE1Q96GM8 510 aaKnown RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 ARID3AQ99856 593 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 GPR174Q9BXC1 333 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 SLC2A11Q9BYW1 496 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 ULBP1Q9BZM6 244 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 UBXN6Q9BZV1 441 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 SLC6A17Q9H1V8 727 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 CAPN10Q9HC96 672 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 ELOVL2Q9NXB9 296 aa8.11□□□□□ -1.11
VPS50-203ENST00000436177 ARMCX3Q9UH62 379 aaPredicted RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 AGO1Q9UL18 857 aaKnown RBP8.11□□□□□ -1.11
VPS50-203ENST00000436177 PLA2G4CQ9UP65 541 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms