RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 ULBP1Q9BZM6 244 aa16.43■□□□□ 0.22
CALD1-208ENST00000435928 MIR1-1HGQ9H1L0 117 aa16.43■□□□□ 0.22
CALD1-208ENST00000435928 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
CALD1-208ENST00000435928 CLEC4EQ9ULY5 219 aa16.43■□□□□ 0.22
CALD1-208ENST00000435928 ZDHHC9Q9Y397 364 aa16.43■□□□□ 0.22
CALD1-208ENST00000435928 PCDHB9Q9Y5E1 797 aa16.43■□□□□ 0.22
CALD1-208ENST00000435928 NBEAQ8NFP9 2946 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 ZFYVE26Q68DK2 2539 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 KCNJ18B7U540 433 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 XPO1O14980 1071 aaKnown RBP16.42■□□□□ 0.22
CALD1-208ENST00000435928 SH3BP5O60239 455 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 ZNF202O95125 648 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 EPHX1P07099 455 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 HARS2P49590 506 aaKnown RBP16.42■□□□□ 0.22
CALD1-208ENST00000435928 COPAP53621 1224 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 TRIP6Q15654 476 aaKnown RBP16.42■□□□□ 0.22
CALD1-208ENST00000435928 MPPE1Q53F39 396 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 SGO2Q562F6 1265 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 DCAF12L1Q5VU92 463 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 PM20D1Q6GTS8 502 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 FMNL3Q8IVF7 1028 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 CHCHD4Q8N4Q1 142 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 SORCS1Q8WY21 1168 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 DNASE2BQ8WZ79 361 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 TATDN2Q93075 761 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 CAMK1GQ96NX5 476 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 IPO9Q96P70 1041 aaKnown RBP16.42■□□□□ 0.22
CALD1-208ENST00000435928 LRRC4Q9HBW1 653 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 HESX1Q9UBX0 185 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 TSPAN16Q9UKR8 245 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
CALD1-208ENST00000435928 ANKRD11Q6UB99 2663 aaPredicted RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 TP53BP1Q12888 1972 aaPredicted RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 SRRM3A6NNA2 597 aaPredicted RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 TULP2O00295 520 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 IGLV3-19P01714 112 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 HOXD9P28356 352 aaPredicted RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 YWHAEP62258 255 aaKnown RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 PDE4CQ08493 712 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 ADIGQ0VDE8 80 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 BST2Q10589 180 aaKnown RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 CUL2Q13617 745 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 TRIP4Q15650 581 aaPredicted RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 BHLHA9Q7RTU4 235 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 RAB44Q7Z6P3 723 aaPredicted RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 SIX6OS1Q8N1H7 587 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 RBBP8NLQ8NC74 664 aaPredicted RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 RNF139Q8WU17 664 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 NDRG1Q92597 394 aaKnown RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 TSG101Q99816 390 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 HBS1LQ9Y450 684 aaKnown RBP16.41■□□□□ 0.22
CALD1-208ENST00000435928 TMEM131Q92545 1883 aa16.41■□□□□ 0.22
CALD1-208ENST00000435928 SLC16A3O15427 465 aaKnown RBP16.4■□□□□ 0.22
CALD1-208ENST00000435928 TIMM44O43615 452 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 TSPAN3O60637 253 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 CER1O95813 267 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 CD19P15391 556 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 ZNF445P59923 1031 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 FNDC3BQ53EP0 1204 aaKnown RBP16.4■□□□□ 0.22
CALD1-208ENST00000435928 EDEM1Q92611 657 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 NUMA1Q14980 2115 aa16.4■□□□□ 0.22
CALD1-208ENST00000435928 METTL12A8MUP2 240 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 BCAT2O15382 392 aaPredicted RBP16.39■□□□□ 0.21
CALD1-208ENST00000435928 FTH1P19P0C7X4 201 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 SETSIPP0DME0 302 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 HLA-EP13747 358 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 HLA-FP30511 346 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 PRCPP42785 496 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 PNOCQ13519 176 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 FAM124AQ86V42 546 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 OR2T3Q8NH03 318 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 WFIKKN2Q8TEU8 576 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 SNX19Q92543 992 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 ABCC13Q9NSE7 274 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 SFMBT1Q9UHJ3 866 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 EIF2B4Q9UI10 523 aaKnown RBP16.39■□□□□ 0.21
CALD1-208ENST00000435928 COQ4Q9Y3A0 265 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 ITPR1Q14643 2758 aa16.39■□□□□ 0.21
CALD1-208ENST00000435928 PTPRBP23467 1997 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 CACNA1GO43497 2377 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 NYNRINQ9P2P1 1898 aaKnown RBP16.38■□□□□ 0.21
CALD1-208ENST00000435928 FAM221BA6H8Z2 402 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 YJEFN3A6XGL0 299 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 E7ENQ6 273 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 MSI1O43347 362 aaKnown RBP16.38■□□□□ 0.21
CALD1-208ENST00000435928 LATS1O95835 1130 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
CALD1-208ENST00000435928 MATKP42679 507 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 CAMK2GQ13555 558 aaPredicted RBP16.38■□□□□ 0.21
CALD1-208ENST00000435928 ADGRF1Q5T601 910 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 BSPRYQ5W0U4 402 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 IL27RAQ6UWB1 636 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 CHST9Q7L1S5 443 aa16.38■□□□□ 0.21
CALD1-208ENST00000435928 AHI1Q8N157 1196 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms