RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ABCB1P08183 1280 aaPredicted RBP11.47□□□□□ -0.57
SCN4A-201ENST00000435607 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 SERPINA4P29622 427 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TGFBR2P37173 567 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TGFB2P61812 414 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 LRIG3Q6UXM1 1119 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ILDR2Q71H61 639 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TLK2Q86UE8 772 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TRAPPC5Q8IUR0 188 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 RASGEF1AQ8N9B8 481 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 SPATA5L1Q9BVQ7 753 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 IDI2Q9BXS1 227 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TMEM39BQ9GZU3 492 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 XPNPEP3Q9NQH7 507 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 KCNH7Q9NS40 1196 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 SLC27A6Q9Y2P4 619 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TTC26A0AVF1 554 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 KPNA5O15131 536 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 PER1O15534 1290 aaPredicted RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 CCNT2O60583 730 aaKnown RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 UCHL3P15374 230 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 ATP6V1B2P21281 511 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 PSMD7P51665 324 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 EXOSC10Q01780 885 aaKnown RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 RGS1Q08116 209 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 BOP1Q14137 746 aaKnown RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SBK1Q52WX2 424 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 PRMT9Q6P2P2 845 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 RNF44Q7L0R7 432 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 STK40Q8N2I9 435 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 TMEM132CQ8N3T6 1108 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SERPINB11Q96P15 392 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 RRAGCQ9HB90 399 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 DUSP12Q9UNI6 340 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 AXLP30530 894 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SARSP49591 514 aaKnown RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 INHBEP58166 350 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SRSF11Q05519 484 aaKnown RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 DENND5BQ6ZUT9 1274 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 EID3Q8N140 333 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 ZNF518BQ9C0D4 1074 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 AP3M1Q9Y2T2 418 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 OR10H1Q9Y4A9 318 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SHROOM2Q13796 1616 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 LDOC1O95751 146 aaPredicted RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 TYMPP19971 482 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 ADRM1Q16186 407 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 ULK2Q8IYT8 1036 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 CCDC185Q8N715 623 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SPPL2AQ8TCT8 520 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 ATG4CQ96DT6 458 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 FRMD6Q96NE9 622 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 MAPKBP1O60336 1514 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 CNTNAP2Q9UHC6 1331 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 DPEP1P16444 411 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 ACAP2Q15057 778 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 PRAMEF18Q5VWM3 479 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 METTL3Q86U44 580 aaKnown RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 KAT2BQ92831 832 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 NSL1Q96IY1 281 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 SLC39A8Q9C0K1 460 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 GPAMQ9HCL2 828 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 CPA4Q9UI42 421 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 ITGA11Q9UKX5 1188 aa11.46□□□□□ -0.57
SCN4A-201ENST00000435607 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.57
SCN4A-201ENST00000435607 CASTOR2A6NHX0 329 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 ITGA8P53708 1063 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 TRAF2Q12933 501 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 CRYMQ14894 314 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 NAB2Q15742 525 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 PTGISQ16647 500 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 TMEM26Q6ZUK4 368 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 SMYD1Q8NB12 490 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 TNS3Q68CZ2 1445 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 RPL9P32969 192 aaKnown RBP11.46□□□□□ -0.58
SCN4A-201ENST00000435607 CBX5P45973 191 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 ACAD10Q6JQN1 1059 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 BRSK2Q8IWQ3 736 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 C4orf33Q8N1A6 199 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 TRPV3Q8NET8 790 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 UTP15Q8TED0 518 aaKnown RBP11.46□□□□□ -0.58
SCN4A-201ENST00000435607 SGF29Q96ES7 293 aa11.46□□□□□ -0.58
SCN4A-201ENST00000435607 GSG1L2A8MUP6 293 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 H3BN98 237 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SNPHO15079 494 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SLC2A4P14672 509 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 CTCFP49711 727 aaPredicted RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 CLK2P49760 499 aaKnown RBP11.45□□□□□ -0.58
SCN4A-201ENST00000435607 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 KIAA0408Q6ZU52 694 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 GPR141Q7Z602 305 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 LRRC6Q86X45 466 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SVOPQ8N4V2 548 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
SCN4A-201ENST00000435607 RP9Q8TA86 221 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms