RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 RNPEPL1Q9HAU8 725 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 CDHR5Q9HBB8 845 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 PLAC1Q9HBJ0 212 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 LRRC4Q9HBW1 653 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 ALG13Q9NP73 1137 aaKnown RBP10.76□□□□□ -0.69
CD44-210ENST00000434472 SMYD2Q9NRG4 433 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 MOCS1Q9NZB8 636 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 SIRPGQ9P1W8 387 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 HES2Q9Y543 173 aa10.76□□□□□ -0.69
CD44-210ENST00000434472 IQCA1LA6NCM1 817 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 SPTLC1O15269 473 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 CBX6O95503 412 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 DLDP09622 509 aaKnown RBP10.75□□□□□ -0.69
CD44-210ENST00000434472 CSH1P0DML2 217 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 CSH2P0DML3 217 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 GOT1P17174 413 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 PGAM1P18669 254 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 AKAP5P24588 427 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 LMO2P25791 158 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 LRPAP1P30533 357 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 PSEN2P49810 448 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 CRYBB1P53674 252 aaPredicted RBP10.75□□□□□ -0.69
CD44-210ENST00000434472 FKBP1BP68106 108 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 MRPS5P82675 430 aaKnown RBP10.75□□□□□ -0.69
CD44-210ENST00000434472 TMPRSS15P98073 1019 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 SNX17Q15036 470 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 PAFAH1B3Q15102 231 aaKnown RBP10.75□□□□□ -0.69
CD44-210ENST00000434472 TBCCQ15814 346 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 UBXN11Q5T124 520 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 CRLF3Q8IUI8 442 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.75□□□□□ -0.69
CD44-210ENST00000434472 B3GALNT2Q8NCR0 500 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 FAM13CQ8NE31 585 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 RNF139Q8WU17 664 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 ATP2A3Q93084 1043 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 FAM149B1Q96BN6 582 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 PTCD3Q96EY7 689 aaKnown RBP10.75□□□□□ -0.69
CD44-210ENST00000434472 OXNAD1Q96HP4 312 aaPredicted RBP10.75□□□□□ -0.69
CD44-210ENST00000434472 SLC2A13Q96QE2 648 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 NPY6RQ99463 290 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 LPIN3Q9BQK8 851 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 WWP1Q9H0M0 922 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 KCNK13Q9HB14 408 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 BATF3Q9NR55 127 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 ARHGEF4Q9NR80 690 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 L3MBTL1Q9Y468 752 aa10.75□□□□□ -0.69
CD44-210ENST00000434472 GLRA3O75311 464 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 MAP3K6O95382 1288 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 BPGMP07738 259 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 MYL2P10916 166 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 ESRRAP11474 423 aaPredicted RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 GNAT1P11488 350 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 NPR3P17342 541 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 PTPN1P18031 435 aaKnown RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 EPHB2P29323 1055 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 GARSP41250 739 aaKnown RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 CPT1AP50416 773 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 ZNF135P52742 658 aaPredicted RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 ATXN1P54253 815 aaKnown RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 DEUP1Q05D60 604 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 IFRD2Q12894 506 aaPredicted RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 DENND5BQ6ZUT9 1274 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 BNIPLQ7Z465 357 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 PIGZQ86VD9 579 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 NDUFAF2Q8N183 169 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 SIX6OS1Q8N1H7 587 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 ENDOVQ8N8Q3 282 aaKnown RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 STKLD1Q8NE28 680 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 ARMC2Q8NEN0 867 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 NPLOC4Q8TAT6 608 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 NSMCE1Q8WV22 266 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 DNAJB3Q8WWF6 145 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 WNT8BQ93098 351 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 NT5C3BQ969T7 300 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 KATNAL1Q9BW62 490 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 BRD8Q9H0E9 1235 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 FAM96AQ9H5X1 160 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 GEMIN8Q9NWZ8 242 aaKnown RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 RRN3Q9NYV6 651 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 IGSF9Q9P2J2 1179 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 GNEQ9Y223 722 aaKnown RBP10.74□□□□□ -0.69
CD44-210ENST00000434472 SCN1AP35498 2009 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 KAT6AQ92794 2004 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 ZNF236Q9UL36 1845 aa10.74□□□□□ -0.69
CD44-210ENST00000434472 WDR27A2RRH5 827 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 HAS3O00219 553 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 RNF103O00237 685 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 EEF2KO00418 725 aaKnown RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 NCAM2O15394 837 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 GYG2O15488 501 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 DIAPH2O60879 1101 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 PEX11AO75192 247 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 VAV1P15498 845 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 SERPINB3P29508 390 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 HCAR3P49019 387 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 LILRA4P59901 499 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 ADAM17P78536 824 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 OCRLQ01968 901 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 NIPAL4Q0D2K0 466 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms